CI01000300_11031273_11033494


Basic Information

Item Value
gene id CI01000300_11031273_11033494
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11031250 ~ 11033794 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11031273_11033494.mRNA
ACCGTAATTACAAAATTTCGACAAACTTTTAATGTCACATACTGTAATGCAGCACTGTCGTTGGTCTTGTGTTTGTGTGCTGCAGTGCGCGTCGTTGGCCGGAGATGGCGCTATTGAGTATATATTTGTTTCAGTGCCGTTTCCCTCCATGGTTTCTGCTCTCCCAGAGTAACTTGGCGCTGGGCTCAGATCATTATACAGTCCCATATTCTCCCTCCATTAAGGCATCTTTCTACCTTTTGGGCTGAACAGAAATTCCTCCAGAACCCAAGAGGGAAGAGTCCAACTTTTGAGGGCGATATGGACATGAAAAAGAGGATTCATTTGGAGCTGAGGAACAGGACACCATCTGATGTACGAGAACTTGTCCTTGACAACTGCAGATCAAATGAAGGGAAAATTGAAGGCCTCACAGCAGAATTTGTTAATCTTGAATTTCTAAGTTTGATAAATGTTGGTCTACTCTCAGTTTCCAACCTTCCTAAACTCGGAAAACTTAAAAAGTTGGAACTCAGTGACAACAGAATTTCTGGTGGCCTTGATGTTTTAGCGGAAAAACTACCCAATCTCACACATCTAAACCTAAGTGGCAACAAACTAAAAGACATCAGCACATTGGAACCCTTGGTTTGTACAAACTTCCTCTCATGAACTTGCATATTTTACACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11031273_11033494.mRNA True 674 mRNA 0.42 3 11031250 11033794

Neighbor

gene id symbol gene type direction distance location
CI01000300_10949572_10953122 NA coding downstream 78128 10949485 ~ 10953122 (-)
CI01000300_10911371_10914529 NA coding downstream 116721 10910908 ~ 10914529 (-)
CI01000300_10846414_10847534 CXXC4.S, CXXC4 coding downstream 182580 10845683 ~ 10848670 (-)
CI01000300_10750564_10751519 NA coding downstream 279731 10750545 ~ 10751519 (-)
CI01000300_10747469_10749727 NA coding downstream 281286 10745512 ~ 10749964 (-)
CI01000300_11038957_11042631 TRMO coding upstream 5131 11038925 ~ 11042631 (-)
CI01000300_11064478_11065542 FOXE1 coding upstream 30150 11063944 ~ 11066747 (-)
CI01000300_11081074_11090283 SH3GL2 coding upstream 46965 11080759 ~ 11090283 (-)
CI01000300_11149202_11277454 CNTLN coding upstream 115408 11149202 ~ 11277454 (-)
CI01000300_11386936_11408339 NA coding upstream 352112 11385906 ~ 11410245 (-)
G415233 NA non-coding downstream 6851 11023991 ~ 11024399 (-)
G415327 NA non-coding downstream 13388 11017101 ~ 11017862 (-)
G415262 NA non-coding downstream 233963 10797006 ~ 10797287 (-)
G415261 NA non-coding downstream 234707 10795773 ~ 10796543 (-)
G415255 NA non-coding downstream 243450 10787566 ~ 10787800 (-)
G415329 NA non-coding upstream 1907 11035701 ~ 11036033 (-)
G415330 NA non-coding upstream 9628 11043422 ~ 11043746 (-)
G415236 NA non-coding upstream 76809 11110603 ~ 11118013 (-)
G415388 NA non-coding upstream 255412 11289206 ~ 11289420 (-)
G415416 NA non-coding upstream 297372 11331166 ~ 11331585 (-)
G414829 NA other downstream 324927 10706000 ~ 10706323 (-)
CI01000300_10698449_10700497 NA other downstream 330616 10696011 ~ 10701375 (-)
G414498 NA other downstream 1370445 9658049 ~ 9713722 (-)
CI01000300_08959695_08973598 UGDH, UGDH.L other downstream 2055250 8958963 ~ 8973750 (-)
G413140 NA other downstream 2884361 8146532 ~ 8146889 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2357810 anp32b unknown NW_023493708.1 JAAXML020000562.1 83176 ~ 89037 (+)
bowfin (Amia calva) AMCG00017948 anp32b coding CM030131.1 CM030131.1 29990646 ~ 30002319 (+)