CI01000300_10747469_10749727


Basic Information

Item Value
gene id CI01000300_10747469_10749727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10745512 ~ 10749964 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_10747469_10749727.mRNA
AAGAACCAGTGGCACGGACCTACATGTCAGTCCCCAAGCCCCTATATGAGGAAATGAAATATTACTTACTTGACTTAATAGCACAAAGGTGGATCGAGAAATCCCATTCTGCGTATGCTTCCCCAGTAGTGTGTGTCAGGAAAAAAATGAGGTTCTCTCCACCTGTGTATTGATTATAGGGAGCTAAATCACAAGACACACCCTGACAAGCAGCCAATCCCTAGACTCCGGGATATGATGGATGGCCTTGGAGGTAACACTATGTTCTTGTTATTAGACCAAGGAAAAGCCTATCACCAGGGGTTCATGGCAAAGGACAGCAAGCACTTGAAAGCCTTTGTGACCCCCTGGGGATTGTATGAGCGGGCTCGGATACCCTTTGGGCTTATGAATGCACCGGCCACTTTTCAGCACTGTATGGAGGAGTGCCTAGAGGGCCTCCATGACAAGATTTGTGTTCCATACTTAGAAGACACTCTTTTATTTAGTAAAACATTTGAGAGTCACGTCAAAGATGTCAGAAAAGTACTACAGAGACTGAGGCAGTATGGAATCAAATTAAAACCCAGCAAATGTGAGCTATTTAGACCTGAGATTCGTTACCTTGGAAGGATAGTATCTGCTGAAGGAAAACAAAATGGACTCCACAGACACTGCTGCCATCAGGGATCTGAAAGAGAAGAGACCAAAAAAACTATTACCTCCACTCAGCTTGACAATTGTAAAGGTGACTACGAATATATTTTAGTGAATGTGGATCACTTTACGCTCTTTGCGCAGGCGTACCCAACCACATCGAAGTCAGGCAAGGTAGTAACGGACAAAATATTCAATGATTATGCAGTCAAGTTCAGCTTTCCGATGAGCATTCACCACGATCAAGGAGATGAGTTCGAAAATCAACTCTTTTCACAATTCAGCAAGTACTGCAGTGTGGCTGGCTTGAGAACAACCCCTTACCACCCACAGGGGAACAGCCAGGTAAAGCGTTTTAATCAAACCTTGATACAGATGCTTAAGACCCTCACGGACAAAGATAAGACCAATTGGAAGAACTCTCTGAAGAAGCTTATATTTGCTTACAACTGTAAACACACCGAAGTGACAGGGTTTTCCCCATTCTACCTCTTGTATGGCCACTCTCCGAGATTATGTGTCGACACGTTGTTCAGTCTTCTGGGTGATGCGGATGGAGGCAGTCACCAGAATTATATGCAAGACTATTGCAAGGGAAAATGCTCACAAAGCTGCCCAGAGGAACAAAAGAAACTATGATGGCAAAGTAAGGAGCACAGTTCTGAGTTCTGGCAACTGTGTGTTGGTCCAGAATTTGACTCCACAAGGAGGACCTGAAAAATTGAGAAATCATTGGGAGGACTCAATTCATGTTGTTGTCAAACAAGTGGGTAAAGATGTTCCTATTTATGAACTAAGACCTGAACATGGAAAAGGGAGTTTGAGAGTTATGCACAGAAACCTCTTATTACCATGTGATCACTTACCTTTTGAAACTGAGGGGCTTCCACCTGTAAAACCAAAGAGAAAAGATGCCAGACCAGCTAAAGTGGACATATCAGTTAAAACCTTACTATCATCAGCTTGTATGCTCTTATGGACTGTAATTTCAATATTCTCCTGATAGTTGAATAGATCCTCAGTGACTTGGGACAAAACTGAGTGTATTCACTAGTACATGAACTATATTCCAGGACTTGAAATCGTACTGAGTTGAGTAGTTTAACAGGACTCTTCCTTAGGGACTCAAATTTAGTGTGAATACATGAACATTTGATACACACCTCACAGTCTGGGATTCAAAAGTAGTGGGTGTTGCTGATATCCAATGTACTGTCTAGTCTGAGACTAGATTAATTCATTACTGGATGAGCCAGACAAACTGAAACTTATATACTGATGTTGGGACAAGGAAACAAAACTTAATATATCAAAAGAGTTTCAGTCTGTAACCACTATACTGAGTATTCTTGAGACAATAGTACTCTTTACTGAGGAATTGATGTTGAGGACAACATCTACTTTTTGGGGGGGGGAGTAATGTAACAGGTATAACTATTAAGAGAGAATATTATTGTTATTATTGTTATTTCATGGTTAATATGTTGTTGGTTCCTGTAATCTGTTATGATGCAGTACCGAAAGACTCAAGCAAAGTGTGGGGCGAGCATAGAGAGTTAATAACAGACACACAGGTTCCCTTCCCCCACTCATAATACAGAGATCGAGGGAAACGCAACAAGTGTTTGTGTGTATCGTGTCTGTTCTTTATTATATCTATGTTCCCCTTTTCATGTAAACCCCTCAATTTCCTAATATTGATGTTCATGCGAGTTTGAGTATATATGATGTTTGTATAATTGTTATATACCCGTATTGTGGGGAAAGAGATGAGATTGAATCGCACATGGTGAACGTGAATAGCTTTCGATGCTATGCTACCGTTTCATGCACTGAACTATAAAAATATGAAGTTTAATGGTGTCTAAAAACTAGTATGATGAAAATTATTATGCTGTTAAGATGAGTTTGCTGTAATGTTATCTCTTTACACTGTTTTATTCTTATTTGAGTTTGTATCGTAGATGAGTGAGTGTTAATGGTTCACGTGCTGAATCGTTCATGTTAAATTTAGCGCCAGCATATTATCACCTCATTAAATTGATGTGTAATGTGTTACCATATTGTGATAACAGAAATATTATGAGATTGAGATGCACTTTGAGTACAGAGTATTTGAGTGCAGATGACCTGTGAGTACAGAGTAATGTATACATAGTATGACGTTCATTCTGATTTATAGGTAATATGAATGACTTATTCTGAATTTTCTTTATTTTATCAGTTATTTCGCCACACATATAGATGCAAGCTGTCTTGTTTATTGTGTGTACTAGAATGGATATAGTGTTTTATGCCAGTTGATGCTCATCTCTTTATTTGTTTTGTCAGCAAATACAATATGGGTAATTTTGTGTATAAAAAGAATGCAGTGGTGTTATATGGAAGTTGGTATGCATTTCATTGTTATTTTGTGAAAAATTGAATGGTTCTTTTACACTCATAATACAGAGATCGAGGTACAATGCAACAAGTGTTTGTGTGTATCGTGTCTGTTCTTTAATATATCTATGTTCCCCTTTTTAGGGAGACTACATATGCGGTTTCGAACACAGCCACAGAATCTTTTGTACTAAATACAATCACCAGAAATAAA

Function

NR:

description
Retrovirus polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_10747469_10749727.mRNA True 3232 mRNA 0.39 3 10745512 10749964

Neighbor

gene id symbol gene type direction distance location
CI01000300_10698449_10700497 NA coding downstream 44137 10696011 ~ 10701375 (-)
CI01000300_10619074_10633587 NA coding downstream 111925 10618864 ~ 10633587 (-)
CI01000300_10614813_10616496 NA coding downstream 129016 10614808 ~ 10616496 (-)
CI01000300_10599691_10601222 NA coding downstream 144290 10599209 ~ 10601222 (-)
CI01000300_10591932_10594068 NA coding downstream 151444 10590384 ~ 10594068 (-)
CI01000300_10750564_10751519 NA coding upstream 581 10750545 ~ 10751519 (-)
CI01000300_10846414_10847534 CXXC4.S, CXXC4 coding upstream 95719 10845683 ~ 10848670 (-)
CI01000300_10911371_10914529 NA coding upstream 160944 10910908 ~ 10914529 (-)
CI01000300_10949572_10953122 NA coding upstream 199521 10949485 ~ 10953122 (-)
CI01000300_11031273_11033494 NA coding upstream 281286 11031250 ~ 11033794 (-)
G414841 NA non-coding downstream 4792 10740504 ~ 10740720 (-)
G414838 NA non-coding downstream 6804 10733609 ~ 10738708 (-)
G414829 NA non-coding downstream 39237 10706000 ~ 10706323 (-)
G414826 NA non-coding downstream 41875 10703389 ~ 10703637 (-)
G414802 NA non-coding downstream 55773 10686386 ~ 10689739 (-)
G414861 NA non-coding upstream 10210 10760174 ~ 10760508 (-)
G414873 NA non-coding upstream 28128 10778092 ~ 10778310 (-)
G415255 NA non-coding upstream 37602 10787566 ~ 10787800 (-)
G415261 NA non-coding upstream 45809 10795773 ~ 10796543 (-)
G415262 NA non-coding upstream 47042 10797006 ~ 10797287 (-)
G414498 NA other downstream 1084707 9658049 ~ 9713722 (-)
CI01000300_08959695_08973598 UGDH, UGDH.L other downstream 1769512 8958963 ~ 8973750 (-)
G413140 NA other downstream 2598623 8146532 ~ 8146889 (-)

Expression


Co-expression Network