RNA id: CI01000300_10747469_10749727.mRNA


Basic Information

Item Value
RNA id CI01000300_10747469_10749727.mRNA
length 3232
RNA type mRNA
GC content 0.39
exon number 3
gene id CI01000300_10747469_10749727
representative True

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10745512 ~ 10749964 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAGAACCAGTGGCACGGACCTACATGTCAGTCCCCAAGCCCCTATATGAGGAAATGAAATATTACTTACTTGACTTAATAGCACAAAGGTGGATCGAGAAATCCCATTCTGCGTATGCTTCCCCAGTAGTGTGTGTCAGGAAAAAAATGAGGTTCTCTCCACCTGTGTATTGATTATAGGGAGCTAAATCACAAGACACACCCTGACAAGCAGCCAATCCCTAGACTCCGGGATATGATGGATGGCCTTGGAGGTAACACTATGTTCTTGTTATTAGACCAAGGAAAAGCCTATCACCAGGGGTTCATGGCAAAGGACAGCAAGCACTTGAAAGCCTTTGTGACCCCCTGGGGATTGTATGAGCGGGCTCGGATACCCTTTGGGCTTATGAATGCACCGGCCACTTTTCAGCACTGTATGGAGGAGTGCCTAGAGGGCCTCCATGACAAGATTTGTGTTCCATACTTAGAAGACACTCTTTTATTTAGTAAAACATTTGAGAGTCACGTCAAAGATGTCAGAAAAGTACTACAGAGACTGAGGCAGTATGGAATCAAATTAAAACCCAGCAAATGTGAGCTATTTAGACCTGAGATTCGTTACCTTGGAAGGATAGTATCTGCTGAAGGAAAACAAAATGGACTCCACAGACACTGCTGCCATCAGGGATCTGAAAGAGAAGAGACCAAAAAAACTATTACCTCCACTCAGCTTGACAATTGTAAAGGTGACTACGAATATATTTTAGTGAATGTGGATCACTTTACGCTCTTTGCGCAGGCGTACCCAACCACATCGAAGTCAGGCAAGGTAGTAACGGACAAAATATTCAATGATTATGCAGTCAAGTTCAGCTTTCCGATGAGCATTCACCACGATCAAGGAGATGAGTTCGAAAATCAACTCTTTTCACAATTCAGCAAGTACTGCAGTGTGGCTGGCTTGAGAACAACCCCTTACCACCCACAGGGGAACAGCCAGGTAAAGCGTTTTAATCAAACCTTGATACAGATGCTTAAGACCCTCACGGACAAAGATAAGACCAATTGGAAGAACTCTCTGAAGAAGCTTATATTTGCTTACAACTGTAAACACACCGAAGTGACAGGGTTTTCCCCATTCTACCTCTTGTATGGCCACTCTCCGAGATTATGTGTCGACACGTTGTTCAGTCTTCTGGGTGATGCGGATGGAGGCAGTCACCAGAATTATATGCAAGACTATTGCAAGGGAAAATGCTCACAAAGCTGCCCAGAGGAACAAAAGAAACTATGATGGCAAAGTAAGGAGCACAGTTCTGAGTTCTGGCAACTGTGTGTTGGTCCAGAATTTGACTCCACAAGGAGGACCTGAAAAATTGAGAAATCATTGGGAGGACTCAATTCATGTTGTTGTCAAACAAGTGGGTAAAGATGTTCCTATTTATGAACTAAGACCTGAACATGGAAAAGGGAGTTTGAGAGTTATGCACAGAAACCTCTTATTACCATGTGATCACTTACCTTTTGAAACTGAGGGGCTTCCACCTGTAAAACCAAAGAGAAAAGATGCCAGACCAGCTAAAGTGGACATATCAGTTAAAACCTTACTATCATCAGCTTGTATGCTCTTATGGACTGTAATTTCAATATTCTCCTGATAGTTGAATAGATCCTCAGTGACTTGGGACAAAACTGAGTGTATTCACTAGTACATGAACTATATTCCAGGACTTGAAATCGTACTGAGTTGAGTAGTTTAACAGGACTCTTCCTTAGGGACTCAAATTTAGTGTGAATACATGAACATTTGATACACACCTCACAGTCTGGGATTCAAAAGTAGTGGGTGTTGCTGATATCCAATGTACTGTCTAGTCTGAGACTAGATTAATTCATTACTGGATGAGCCAGACAAACTGAAACTTATATACTGATGTTGGGACAAGGAAACAAAACTTAATATATCAAAAGAGTTTCAGTCTGTAACCACTATACTGAGTATTCTTGAGACAATAGTACTCTTTACTGAGGAATTGATGTTGAGGACAACATCTACTTTTTGGGGGGGGGAGTAATGTAACAGGTATAACTATTAAGAGAGAATATTATTGTTATTATTGTTATTTCATGGTTAATATGTTGTTGGTTCCTGTAATCTGTTATGATGCAGTACCGAAAGACTCAAGCAAAGTGTGGGGCGAGCATAGAGAGTTAATAACAGACACACAGGTTCCCTTCCCCCACTCATAATACAGAGATCGAGGGAAACGCAACAAGTGTTTGTGTGTATCGTGTCTGTTCTTTATTATATCTATGTTCCCCTTTTCATGTAAACCCCTCAATTTCCTAATATTGATGTTCATGCGAGTTTGAGTATATATGATGTTTGTATAATTGTTATATACCCGTATTGTGGGGAAAGAGATGAGATTGAATCGCACATGGTGAACGTGAATAGCTTTCGATGCTATGCTACCGTTTCATGCACTGAACTATAAAAATATGAAGTTTAATGGTGTCTAAAAACTAGTATGATGAAAATTATTATGCTGTTAAGATGAGTTTGCTGTAATGTTATCTCTTTACACTGTTTTATTCTTATTTGAGTTTGTATCGTAGATGAGTGAGTGTTAATGGTTCACGTGCTGAATCGTTCATGTTAAATTTAGCGCCAGCATATTATCACCTCATTAAATTGATGTGTAATGTGTTACCATATTGTGATAACAGAAATATTATGAGATTGAGATGCACTTTGAGTACAGAGTATTTGAGTGCAGATGACCTGTGAGTACAGAGTAATGTATACATAGTATGACGTTCATTCTGATTTATAGGTAATATGAATGACTTATTCTGAATTTTCTTTATTTTATCAGTTATTTCGCCACACATATAGATGCAAGCTGTCTTGTTTATTGTGTGTACTAGAATGGATATAGTGTTTTATGCCAGTTGATGCTCATCTCTTTATTTGTTTTGTCAGCAAATACAATATGGGTAATTTTGTGTATAAAAAGAATGCAGTGGTGTTATATGGAAGTTGGTATGCATTTCATTGTTATTTTGTGAAAAATTGAATGGTTCTTTTACACTCATAATACAGAGATCGAGGTACAATGCAACAAGTGTTTGTGTGTATCGTGTCTGTTCTTTAATATATCTATGTTCCCCTTTTTAGGGAGACTACATATGCGGTTTCGAACACAGCCACAGAATCTTTTGTACTAAATACAATCACCAGAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU476467 lncRNA downstream 4792 10740504 ~ 10740720 (-) True G414841
TU476464 lncRNA downstream 6804 10733609 ~ 10738708 (-) True G414838
TU476453 lncRNA downstream 39237 10706000 ~ 10706275 (-) True G414829
TU476447 lncRNA downstream 41875 10703389 ~ 10703637 (-) True G414826
TU476423 lncRNA downstream 55773 10686386 ~ 10689739 (-) True G414802
TU476487 lncRNA upstream 10210 10760174 ~ 10760508 (-) True G414861
TU476499 lncRNA upstream 28128 10778092 ~ 10778310 (-) True G414873
TU476960 lncRNA upstream 37602 10787566 ~ 10787800 (-) True G415255
TU476966 lncRNA upstream 45809 10795773 ~ 10796543 (-) True G415261
TU476967 lncRNA upstream 47042 10797006 ~ 10797287 (-) True G415262
CI01000300_10698449_10700497.mRNA mRNA downstream 44137 10697814 ~ 10701375 (-) False CI01000300_10698449_10700497
CI01000300_10619074_10633587.mRNA mRNA downstream 111925 10618864 ~ 10633587 (-) True CI01000300_10619074_10633587
CI01000300_10614813_10616496.mRNA mRNA downstream 129016 10614808 ~ 10616496 (-) True CI01000300_10614813_10616496
CI01000300_10599691_10601222.mRNA mRNA downstream 144290 10599209 ~ 10601222 (-) True CI01000300_10599691_10601222
CI01000300_10591932_10594068.mRNA mRNA downstream 151444 10590384 ~ 10594068 (-) True CI01000300_10591932_10594068
CI01000300_10750564_10751519.mRNA mRNA upstream 581 10750545 ~ 10751519 (-) True CI01000300_10750564_10751519
CI01000300_10846414_10847534.mRNA mRNA upstream 95719 10845683 ~ 10848670 (-) True CI01000300_10846414_10847534
CI01000300_10911371_10914529.mRNA mRNA upstream 160944 10910908 ~ 10914529 (-) True CI01000300_10911371_10914529
CI01000300_10949572_10953122.mRNA mRNA upstream 199521 10949485 ~ 10953122 (-) True CI01000300_10949572_10953122
CI01000300_11031273_11033494.mRNA mRNA upstream 281286 11031250 ~ 11033794 (-) True CI01000300_11031273_11033494
TU476450 other downstream 39189 10706000 ~ 10706323 (-) False G414829
TU476415 other downstream 44878 10696011 ~ 10700634 (-) True CI01000300_10698449_10700497
TU476061 other downstream 1084707 9658049 ~ 9660805 (-) False G414498
TU476052 other downstream 1084707 9658987 ~ 9660805 (-) False G414498
TU475129 other downstream 1769512 8969448 ~ 8976000 (-) True G413664

Expression Profile