Gene
RNA
| Item | Value |
|---|---|
| gene id | G412517 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 6179702 ~ 6180110 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473828 | True | 409 | lncRNA | 0.45 | 1 | 6179702 | 6180110 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_06039087_06039798 | NA | coding | downstream | 138832 | 6038932 ~ 6040870 (-) |
| CI01000300_05982822_06013144 | SORBS2A, SORBS2 | coding | downstream | 166558 | 5982379 ~ 6013144 (-) |
| CI01000300_05966800_05976695 | PDLIM3A, PDLIM3 | coding | downstream | 203007 | 5966112 ~ 5976695 (-) |
| CI01000300_05962858_05963880 | NA | coding | downstream | 215576 | 5962834 ~ 5964126 (-) |
| CI01000300_05956128_05961938 | UFSP2 | coding | downstream | 217764 | 5956014 ~ 5961938 (-) |
| CI01000300_06282739_06327586 | MTNR1AA, MTNR1AB, MTNR1A | coding | upstream | 102629 | 6282739 ~ 6327586 (-) |
| CI01000300_06347127_06393685 | KLHL5 | coding | upstream | 166827 | 6346937 ~ 6393685 (-) |
| CI01000300_06434048_06444297 | FAM114A1 | coding | upstream | 253579 | 6433689 ~ 6444297 (-) |
| CI01000300_06445229_06453282 | NA | coding | upstream | 265049 | 6445159 ~ 6453282 (-) |
| CI01000300_06557191_06577750 | PGM2 | coding | upstream | 376901 | 6557011 ~ 6578140 (-) |
| G412502 | NA | non-coding | downstream | 18314 | 6160884 ~ 6161388 (-) |
| G412480 | NA | non-coding | downstream | 44969 | 6134482 ~ 6134733 (-) |
| G412436 | NA | non-coding | downstream | 52829 | 6048237 ~ 6126873 (-) |
| G412448 | NA | non-coding | downstream | 84818 | 6094555 ~ 6094884 (-) |
| G412376 | NA | non-coding | downstream | 202488 | 5976819 ~ 5977214 (-) |
| G412521 | NA | non-coding | upstream | 3674 | 6183784 ~ 6184130 (-) |
| G412528 | NA | non-coding | upstream | 9901 | 6190011 ~ 6190461 (-) |
| G412550 | NA | non-coding | upstream | 29504 | 6209614 ~ 6210070 (-) |
| G412551 | NA | non-coding | upstream | 31543 | 6211653 ~ 6211861 (-) |
| G412566 | NA | non-coding | upstream | 46970 | 6227080 ~ 6227290 (-) |
| G412378 | NA | other | downstream | 418513 | 5711685 ~ 5761189 (-) |
| G411012 | NA | other | downstream | 1784581 | 4390320 ~ 4395121 (-) |
| CI01000300_04075307_04079312 | NA | other | downstream | 2097600 | 4074636 ~ 4080539 (-) |
| G410498 | NA | other | downstream | 2371495 | 3801139 ~ 3808207 (-) |
| G409775 | NA | other | downstream | 3315704 | 2863158 ~ 2863998 (-) |
| G412555 | NA | other | upstream | 34810 | 6214920 ~ 6215579 (-) |
| G412681 | NA | other | upstream | 472888 | 6652998 ~ 6690333 (-) |
| G413140 | NA | other | upstream | 1966422 | 8146532 ~ 8146889 (-) |
| CI01000300_08959695_08973598 | UGDH, UGDH.L | other | upstream | 2789338 | 8958963 ~ 8973750 (-) |
| G414498 | NA | other | upstream | 3477939 | 9658049 ~ 9713722 (-) |
