G414073


Basic Information

Item Value
gene id G414073
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9773162 ~ 9773839 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU475564
ACCAATTTATATTTTCAAATCTGTTAAAGGATTATTAGGCTGCATAAATTAGGTCAGCCGGAACCGGGAACACTTCCTATAATGCCTGATGTACTCATTACATCAGAAGAAGAATGGCATCTATGCTAATATTAGTCTTTCTGGTTATCCCGAGGTTCACCGTAGTCAACCGGATCCGGGCCGTATCCAGGTGAGACCAAGGACCTGCACCTTGACACGACCACAACGCAGCCCTGAAGTATCAGCAGAGATTGAGTCAACTAGATCATCCACTGTGAGGGCCTCATCGACACGACAGCCACGACACAGTTCCTCAACAACCGTCCATACCGCCGTGATGAATACGATCCTCAATTGGATGGAACTGGAATAAATACTTTGAATGTTGCGATCCTGTCGGACTTATGATAGCTACCTGAATCGTAACAAAGCACTGTTGGCCAGAGGAGAACTGGCCCCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTAAACACCTATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTTAAGAGCTGCTGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475564 True 678 lncRNA 0.46 1 9773162 9773839

Neighbor

gene id symbol gene type direction distance location
CI01000300_09765979_09766870 DCTPP1 coding upstream 6008 9765979 ~ 9767154 (+)
CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding upstream 31125 9724270 ~ 9742037 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding upstream 111451 9658054 ~ 9661711 (+)
CI01000300_09541949_09542458 NA coding upstream 230413 9541490 ~ 9542749 (+)
CI01000300_09486849_09487928 MAB21L2.S, MB211, MAB21L1, MAB21L2, MAB21L1.L, MAB21L2.L coding upstream 285138 9485781 ~ 9488024 (+)
CI01000300_09893990_09906715 NA coding downstream 117249 9891088 ~ 9906738 (+)
CI01000300_10056666_10057133 NA coding downstream 282731 10056570 ~ 10057457 (+)
CI01000300_10094312_10098589 NA coding downstream 320093 10093932 ~ 10098669 (+)
CI01000300_10167118_10172235 NA coding downstream 393279 10167118 ~ 10172235 (+)
CI01000300_10357507_10366851 PLRG1 coding downstream 583668 10357507 ~ 10367008 (+)
G414114 NA non-coding upstream 814 9772008 ~ 9772348 (+)
G414089 NA non-coding upstream 80731 9691675 ~ 9692431 (+)
G413904 NA non-coding upstream 378255 9394650 ~ 9394907 (+)
G413903 NA non-coding upstream 378867 9394067 ~ 9394295 (+)
G413902 NA non-coding upstream 379300 9393001 ~ 9393862 (+)
G414127 NA non-coding downstream 37784 9811623 ~ 9811861 (+)
G414128 NA non-coding downstream 42096 9815935 ~ 9816158 (+)
G414133 NA non-coding downstream 62424 9836263 ~ 9836485 (+)
G414144 NA non-coding downstream 81571 9855410 ~ 9855703 (+)
G414146 NA non-coding downstream 91353 9865192 ~ 9865407 (+)
G413459 NA other upstream 824559 8857687 ~ 8948603 (+)
G411777 NA other upstream 3303457 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 3880737 5891021 ~ 5892824 (+)
G410388 NA other upstream 5576607 4195646 ~ 4196555 (+)
G410382 NA other upstream 5648746 4123698 ~ 4124416 (+)
G414249 NA other downstream 596072 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 826097 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 872352 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 1929645 11704476 ~ 11708351 (+)

Expression


Co-expression Network