XLOC_012556 (CU595864.1)


Basic Information

Item Value
gene id XLOC_012556
gene name CU595864.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 5528981 ~ 5539574 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025141
CGATGACGGTCTGAGGAGAATGCGAATCGTGACGGACTCAACATCTGAAGCGCCTTCAGAAAATACTTCTGTCTCACGCAAGAAACGGCGAGTCCATCCTCACGCAGAGCCAACAGAGCCGCCTGAGACACACACAAGAGTCCAGCTTTACACATCTCAGCAGGAACAAATGAGTTTCTTATGgtcacCTGGAGGTCAGGAGGAGGCACGTATATGATCTGGTCGAGTCGTCCAGGTCTGAGCAGAGCGCTGTCCAGAGCCTCGGGTCTGTTAGTGGCGGCCACAATCAAAACATCCTTATTGCACACTTCCTGCAGCTCCATCTGAAATGTGCTCCGTCTCTCCAGCGTTCGCACGCCCACCCCATCCAGCTCCGTCAGCAGAACCGACAGAACCTGCGACTGCACGCTGTGGGAAGAAGAAGAGCCGTCCTCTCGAGAGCCCACCATACTGTCCACCTCATCCAGGAACACGATAGATGGAGCACACGCTCGCGCCTGAGCGAACAGCTGaccgCAGAAGCGTACCTGACAGATCTACTAGATGTCCCTCGTGCACGTATATACCGTCCAGCAGCTCCTGGAGACTCCGCTCTGAAACCCTCTTCTTGTGCTCCAGACGCTGCACGAACACCTTcagcttcacacag
>TCONS_00025142
gtcacCTGGAGGTCAGGAGGAGGCACGTATATGATCTGGTCGAGTCGTCCAGGTCTGAGCAGAGCGCTGTCCAGAGCCTCGGGTCTGTTAGTGGCGGCCACAATCAAAACATCCTTATTGCACACTTCCTGCAGCTCCATCTGAAATGTGCTCCGTCTCTCCAGCGTTCGCACGCCCACCCCATCCAGCTCCGTCAGCAGAACCGACAGAACCTGCGACTGCACGCTGTGGGAAGAAGAAGAGCCGTCCTCTCGAGAGCCCACCATACTGTCCACCTCATCCAGGAACACGATAGATGGAGCACACGCTCGCGCCTGAGCGAACAGCTGaccgAAGCGTACCTGACAGATCTACTAGATGTCCCTCGTGCACGTATATACCGTCCAGCAGCTCCTGGAGACTCCGCTCTGAAACCCTCTTCTTGTGCTCCAGACGCTGCACGAACACCTTcagcttcacacaggtcTGGTGACACACACTGGCTGCTGATTTGCAGATATCCATCTGC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095291

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025141 False 649 processed_transcript 0.55 5 5528981 5539455
TCONS_00025142 True 508 processed_transcript 0.57 4 5531522 5539574

Neighbor

gene id symbol gene type direction distance location
XLOC_012554 NA coding upstream 23403 5502958 ~ 5505578 (+)
XLOC_012553 mibp2 coding upstream 31576 5490668 ~ 5497405 (+)
XLOC_012552 dtwd1 coding upstream 67558 5454341 ~ 5461423 (+)
XLOC_012551 fgf7 coding upstream 75160 5428472 ~ 5453821 (+)
XLOC_012550 dut coding upstream 210015 5308392 ~ 5318966 (+)
XLOC_012557 nnt2 coding downstream 4103 5543677 ~ 5557060 (+)
XLOC_012558 NA coding downstream 61570 5601144 ~ 5601676 (+)
XLOC_012559 ulk3 coding downstream 78794 5618368 ~ 5641730 (+)
XLOC_012560 NA coding downstream 118753 5658327 ~ 5667616 (+)
XLOC_012561 NA coding downstream 133340 5672914 ~ 5677366 (+)
XLOC_012549 CZQB01123183.1 non-coding upstream 250990 5277875 ~ 5277991 (+)
XLOC_012544 NA non-coding upstream 407875 5111784 ~ 5121106 (+)
XLOC_012543 NA non-coding upstream 486528 5041943 ~ 5042453 (+)
XLOC_012542 CR792425.2 non-coding upstream 525597 5003269 ~ 5003384 (+)
XLOC_012563 NA non-coding downstream 297524 5837098 ~ 5839834 (+)
XLOC_012570 BX321877.1 non-coding downstream 761034 6300608 ~ 6305665 (+)

Expression


Co-expression Network