CI01000304_11449463_11453214


Basic Information

Item Value
gene id CI01000304_11449463_11453214
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 11448966 ~ 11453315 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_11449463_11453214.mRNA
CTATTTATACTGCGTTAGAGAATTTAATTCACACTTTATACAGACACACATACACAAACTGAGATGTGAATTACTGGTATGAATTACTATGCAGTACTTAAAACAAACAGAATAAATCTATGTCGGTAAGAAAGAACTTCTCTTTTAGTCAGAATTGTGTCTGAGCTATGGCTCAGAGATATACTGGTAGACCATTGTCGAATAACTCATATGAGTTTTGTAATATTATCTCTGTTGCGGTTTTGCTCATGTGGCATGCAATGTTGTGTTGCAAAACTTTTCATACATTTTTAGGCCTTGTCATGTAACATTTACTATTGTTCAGCAAAAGTCAGACATTTAAAAAGGAATCTACGTGTTTGTGACTTTCACGTGAGAGCAGAAAATTCCCCATGCAGATTTCGCAATGCATTCTATAGGCAACGCATTTAATGGAACTAGCTGAAGGGTCAGGTTAAGATGAGATTAATAGTGAGAGGAGCGATAGCGTTCGGTGGATGGGCATTGATGTTGTGGAGAATAGACAGAACGCAGATCTAGTTTGGGGGAGAGAGTTAGGAGGGAGAAGGGCCAAGGCTGAGGATGTTTGTGGAGGCAGCCTCATGCTTGGGACCTGGGGAGGAACAGGGAGGGCTACAGACAGGGGAGAGGGGAGAGGGTTAGAAACAACAGAAGGAAGAAGCTGTGACGTCTGGGCCTCTGCTGCTAATGGAGGCATCCTCACGCTAGAGTCTGCTGTTGGAGCTGGAGGCCACAGTGAAGCTATGCGAAAAATTCAACCTGGGACAGGACACAAGAAGGATTTGAGCTGTGCTCTTGTGGGGCTGAGCAGACGGGTGGAGAGGATGACTAAATGGGCTGGAGTCGAGAAAGACACGGAGGAAGATGGCGAATGTCTAGCTGGCGGGGCCAGGTCTTCTCCAGGTGTTGGTCTGCCTTTTAGCAGGTCGTATCCTGTGAACAGCCACCTGTGGGTCACAAAGCAGCTCTCTCTGGTCCATCCCCACCATCTGCCCGACACACCAACATACACACCTGCACACACATATGCCAACATGACACCTCATGAATACAGAGTATGTGACACCATTATTTTCTGTGTTCAGTGACCGTAAAATATAGTTTGAAATGTTGTAGCTCAACAACACCAAAGCTGTGTGTTCAAATTCTCATACTAGCAAAGTATTTATACACTGATAATTTCAGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_11449463_11453214.mRNA True 1210 mRNA 0.45 5 11448966 11453315

Neighbor

gene id symbol gene type direction distance location
CI01000304_11323923_11325889 NA coding upstream 123061 11322230 ~ 11325905 (+)
CI01000304_11318496_11322260 NA coding upstream 126477 11318436 ~ 11322489 (+)
CI01000304_11308263_11317998 TPTE2, TPTE coding upstream 130903 11307048 ~ 11318063 (+)
CI01000304_11301321_11304134 THSD1 coding upstream 144534 11300878 ~ 11304432 (+)
CI01000304_11288992_11297645 VPS36 coding upstream 150817 11288992 ~ 11298149 (+)
CI01000304_11570457_11574856 CHORDC1 coding downstream 117142 11570457 ~ 11575290 (+)
CI01000304_11582257_11610398 GRM5, GRM5A coding downstream 128493 11581808 ~ 11610611 (+)
CI01000304_11613446_11620345 RAB38 coding downstream 160131 11613446 ~ 11620563 (+)
CI01000304_11676155_11681977 MAP3K7CL coding downstream 222840 11676155 ~ 11683131 (+)
CI01000304_11685224_11691071 NA coding downstream 231909 11685224 ~ 11691071 (+)
G425277 NA non-coding upstream 2593 11435670 ~ 11446373 (+)
G425273 NA non-coding upstream 15925 11432780 ~ 11433041 (+)
G425036 NA non-coding upstream 93837 11347279 ~ 11355129 (+)
G425049 NA non-coding upstream 98902 11348053 ~ 11350064 (+)
G425030 NA non-coding upstream 110522 11329668 ~ 11338444 (+)
G425294 NA non-coding downstream 16451 11469766 ~ 11470005 (+)
G425316 NA non-coding downstream 59174 11512489 ~ 11512701 (+)
G425317 NA non-coding downstream 61457 11514772 ~ 11526899 (+)
G425338 NA non-coding downstream 112639 11565954 ~ 11569871 (+)
G425354 NA non-coding downstream 167791 11621106 ~ 11621440 (+)
CI01000304_10555326_10571933 NA other upstream 893262 10555216 ~ 10572164 (+)
G424251 NA other upstream 1256071 10188822 ~ 10189404 (+)
G424246 NA other upstream 1321644 10116343 ~ 10127322 (+)
CI01000304_09564068_09565679 HRH2B other upstream 1883393 9561005 ~ 9565778 (+)
G423614 NA other upstream 2499544 8949036 ~ 8949422 (+)
G425718 NA other downstream 975390 12436554 ~ 12436605 (+)
CI01000304_13578347_13595075 NA other downstream 2103136 13578049 ~ 13595097 (+)
G426312 NA other downstream 2876733 14330048 ~ 14330886 (+)
G426828 NA other downstream 3495575 14948890 ~ 14950592 (+)
G427860 NA other downstream 4432139 15885454 ~ 15889591 (+)

Expression


Co-expression Network