Gene
RNA
| Item | Value |
|---|---|
| gene id | G421655 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 4107263 ~ 4107557 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU484255 | False | 249 | lncRNA | 0.47 | 2 | 4107263 | 4107557 |
| TU484256 | True | 247 | lncRNA | 0.47 | 2 | 4107263 | 4107557 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_04012800_04017022 | SKOR2 | coding | downstream | 89986 | 4012800 ~ 4017277 (-) |
| CI01000304_04007023_04008270 | YEE9, IER3IP1 | coding | downstream | 98207 | 4006069 ~ 4009056 (-) |
| CI01000304_03997982_04001803 | HDHD2 | coding | downstream | 105460 | 3997982 ~ 4001803 (-) |
| CI01000304_03960519_03974458 | NA | coding | downstream | 132805 | 3960324 ~ 3974458 (-) |
| CI01000304_03937239_03940929 | NA | coding | downstream | 165901 | 3936864 ~ 3941362 (-) |
| CI01000304_04144667_04151439 | MAD2, SMAD2 | coding | upstream | 36903 | 4144460 ~ 4153533 (-) |
| CI01000304_04161154_04166640 | NA | coding | upstream | 52659 | 4160216 ~ 4166640 (-) |
| CI01000304_04227914_04228723 | NA | coding | upstream | 119563 | 4227120 ~ 4229143 (-) |
| CI01000304_04230808_04231542 | NA | coding | upstream | 122258 | 4229815 ~ 4231901 (-) |
| CI01000304_04253975_04256004 | NA | coding | upstream | 145854 | 4253411 ~ 4257602 (-) |
| G421471 | NA | non-coding | downstream | 318337 | 3788719 ~ 3788926 (-) |
| G421465 | NA | non-coding | downstream | 347518 | 3759418 ~ 3759745 (-) |
| G420150 | NA | non-coding | downstream | 629154 | 3419922 ~ 3478109 (-) |
| G420221 | NA | non-coding | downstream | 718050 | 3387678 ~ 3389213 (-) |
| G421663 | NA | non-coding | upstream | 128740 | 4236297 ~ 4237760 (-) |
| G421719 | NA | non-coding | upstream | 195599 | 4303156 ~ 4303880 (-) |
| G421723 | NA | non-coding | upstream | 204802 | 4312359 ~ 4314973 (-) |
| G421728 | NA | non-coding | upstream | 228167 | 4335724 ~ 4335942 (-) |
| G421740 | NA | non-coding | upstream | 255909 | 4363466 ~ 4363736 (-) |
| G419354 | NA | other | downstream | 1841022 | 2262502 ~ 2266241 (-) |
| G419353 | NA | other | downstream | 1871157 | 2229384 ~ 2236106 (-) |
| CI01000304_04263955_04264962 | NA | other | upstream | 156188 | 4263846 ~ 4265201 (-) |
| CI01000304_04661808_04672936 | PPWD1 | other | upstream | 554259 | 4661766 ~ 4672947 (-) |
| CI01000304_06480836_06483554 | SUB1L2, SUB1A, SUB1 | other | upstream | 2369894 | 6480743 ~ 6483986 (-) |
| G422354 | NA | other | upstream | 2523529 | 6631086 ~ 6631499 (-) |
| G422378 | NA | other | upstream | 2637122 | 6744679 ~ 6783046 (-) |
