CI01000306_01633237_01635512 (HRASLS)


Basic Information

Item Value
gene id CI01000306_01633237_01635512
gene name HRASLS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 1633073 ~ 1636773 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_01633237_01635512.mRNA
ACGCAAATGGACAAAGATTTAAAATAGCGGATTATTTTTCCCTCAGAATGTGCAGAATTATGCTTTGGGATGATGGATAATCAACATAGAAGAACTGTTAATGTGAGTAAACGAGCACGTTTAAAAAAATAAATAAATAAATAAAATAAAAAATACTTAGAAATGTGTGTGAATGAGCTAAACAGCGCTGTGGAAAATAATGTGTTTACTATACACGATTTTCATAAACCAAGAAAGCGTATAAAATAATAAATAATCGACAGACAAGCTAAAATACAACAGAATTACCCATGGTGCACTGTTTTGTGCACTAATGTTCGAACTATTTAACTAACATGACACAATTAAAACGAAAATTCTGTCATTTATTACTCACCCTCATGTCGTTCCAAACCCGTAAGACTTTCGTTCATCTTCGGAACACAAATTAAGATTTCTGTCCTTCCATAGCCTTCGCAACTTCCACTTTCAATGTATTTTAGACATCATTAAAGTAACCCATTAAAGTAATCCATTCCAGTAGTTTAACCTCAGTTTTATGAAGCGACATGGGTGCTTCGTTTGTGTAAAAAGCATAATTTATCACTTTATTTACAAAGTATTAATTTCCAACGCACCTTCACGCGAGCATCACAACGTATGCGTGTTGAGCAGCCGTTATTTCGTGAACGCGCGATTTAGATTAACAACGGTTTTCCTATAGACGAATATTTGCCCGTTCACACAAAGGACGATAACTATAATGAAAACGATAAATAGTTCTAAAAATCGTTATACATACAAAAGAATAGCAGAGTTCACACCACAACTAAAACTATAAATGCACAGAGAAACAATATTGTTGGAATCACTTTCGGATGTTTTTTTCAGCTAATGAACGATAAAAACATTGACAGCCAATCAGAGTCCATCCTGCTTTAAAGAGCGCGAGCATTTAAAGTGACAGACGACAAAACTGCAGCGCACTTATAATAATAAACGGAACGATATCTTCCGCTGGTGTGGACGCTAATATAGTTATCGTTCTTGGTGTGAACGAGCCTAGGGAGAAGGATCACAAAATGATGTGGATTTTATGTGGAAGCTTCTTGGAAAAATTTAAAACCTGCAAATGGAAAACATCATTAATCAAATGTAGGTCTGTTACTGTTAAAGAAACAGCACGCAAAAAATACAAATAGTAGAATTCTTCATTGCTGAAAGTGAACTTCTATGTCATTTTATACTGTCCTTTGACTGTCAGTTTCTCTGATTGCTTCAGATGGCCTCCAGCGAACCTCATACTTATCAATCTAATGAGGAACCCCAGCCTGGTGACCTCATCGAGATCTTCAGACCAGCCTATCAGCACTGGGCTCTTTACCTGGGAGATGGATACATCATCAACCTCACTCCTGTCGATGAGGGTCAAGCAGCCGCCATGTCCAGCGTGAAGTCTGTGTTCAGCCGGAAGGCCGTGGTGCGCATGCAGCTCTTAAAGGAGGTTGTGGGGGCAGATTCATTCAGGATCAACAATAAATATGATGATAATCACACGCCCCTGCCCGTCTCTGAGATCATTCAGCGGGCTCAGCTCCTCATTGGACAGGAGGTGTCATATGACCTGCTGGGCAGCAACTGTGAACACTTTGTCACTCTTCTTCGCTATGGGGAGGGAGTGTCTGAACAGGTTTCTCATTCTTTACCTCTGTGCACTAACCAAAAATACCACATTATTACCATGTTTCAGGAATTTGGCGTCACGGGCGATAGGTGCCATCAGTTTGGTGACTGCTGCAGCAAGTGCTTTCTCAGTGCTGGGACTCATCAACACACGCTCCAGAAACAGACCGTTCTAGATCTGCTGAAGCTCAGACCACATGAGACATTATATACATGGAGTGATCTGAATTATTATATCTGCTGACCTTTTCATTTGGATGGAAAGACTGTAGGCCATCTGACAAAACAGCTGTCAAAAGTTAAATGTCTTTGATATACTCAGCTTTTTAGGTTGAAAACAAGTTGTGTGACAATGCAATGAACCTTTGCTGTGACAACTTGATATGGTATTCATAGAAATGAAATAAA

Function

NR:

description
Zgc:92715

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_01633237_01635512.mRNA True 2070 mRNA 0.39 3 1633073 1636773

Neighbor

gene id symbol gene type direction distance location
CI01000306_01580628_01611787 SOS1 coding downstream 21286 1580374 ~ 1611787 (-)
CI01000306_01572341_01576690 NA coding downstream 56383 1572341 ~ 1576690 (-)
CI01000306_01514599_01534002 HNRNPLL, HNRLL coding downstream 99071 1514355 ~ 1534002 (-)
CI01000306_01502721_01504240 NA coding downstream 128833 1502666 ~ 1504240 (-)
CI01000306_01483485_01492511 ATL2, ATL2.L coding downstream 140562 1482872 ~ 1492511 (-)
CI01000306_01665458_01676209 NA coding upstream 28024 1664797 ~ 1676223 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG coding upstream 86906 1717933 ~ 1726043 (-)
CI01000306_01756353_01763570 PYCR1B, PYCR1.L, PYCR1, PYCR1A, PYCR2 coding upstream 119402 1756175 ~ 1764246 (-)
CI01000306_01775235_01776152 NA coding upstream 138424 1775197 ~ 1776432 (-)
CI01000306_01792788_01804803 ASPSCR1 coding upstream 156015 1792788 ~ 1804803 (-)
G431732 NA non-coding downstream 7056 1625345 ~ 1626017 (-)
G431764 NA non-coding downstream 120803 1508586 ~ 1512270 (-)
G431890 NA non-coding downstream 129393 1503389 ~ 1503680 (-)
G431760 NA non-coding downstream 201507 1430802 ~ 1431566 (-)
G431774 NA non-coding downstream 202967 1429374 ~ 1430106 (-)
G431737 NA non-coding upstream 68576 1705349 ~ 1706071 (-)
G431746 NA non-coding upstream 90716 1727489 ~ 1732425 (-)
G431757 NA non-coding upstream 95972 1732745 ~ 1740620 (-)
G431747 NA non-coding upstream 116641 1753414 ~ 1754504 (-)
G431913 NA non-coding upstream 148812 1785585 ~ 1786256 (-)
G431814 NA other downstream 320639 1311702 ~ 1312434 (-)
G431706 NA other downstream 469735 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 1149424 482482 ~ 494090 (-)
G432022 NA other upstream 1363463 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 2905950 4542723 ~ 4545244 (-)
G433450 NA other upstream 3724870 5361643 ~ 5383763 (-)
G433670 NA other upstream 4404241 6041014 ~ 6041283 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G58309 LOC108267102 non-coding NC_047598.1 CM018544.1 2015291 ~ 2039115 (+)