CI01000306_03814414_03823373 (ACAD9, ACAD9.S)


Basic Information

Item Value
gene id CI01000306_03814414_03823373
gene name ACAD9, ACAD9.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3814414 ~ 3823373 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03814414_03823373.mRNA
ATGAGTCTGACCAAACTTACTCTTTTGACAAATACGGTCAAGCTTGGGAGAAATGTGTTCGCTGCACGAGTCGCACAAACAGGAGATTGTCTACATCACTTTCAGTCGCGGCGCTCCGTTAGATCCAGTTCGAGGAGTTTGGCATATGCTAAAGATCTGTTTCTGGGCAAAGTAAACAAGGCTGAAGTCTTTCCCTACCCAGAAATCAGCAATGAAGAACTGGAGGAGATAAACCAACTTGTTCAGCCTGTGGAGAAGTTTTTCAGTGAAGATGTTGATTCTAAGAAGATCGACCAGGAGGCTGTAATTCCTTCTGAGACTTTGAATGGGCTGAAGGAACTGGGGCTGTTTGGAATCCAGATACCTGAAGAATATGGTGGTCTGGGCCTCTCAAACACCATGTATGCCAGGTTAGGAGAGATCACGTCTTTAGATGGGTCTATTGCGGTCACGCTTGCAGCACATCAAGCCATTGGCCTGAAGGGAATTTTGATTGCTGGAAATGATGCTCAGAAAGCAAAATACCTGCCCAAACTAGCAACAGGAGAGCATATTGCAGCTTTCTGCCTCACTGAACCTGGAAGCGGCAGTGATGCTGCATCTATACAGGCACGGGCCACGCTGACAGAAGATGGGAAGCACTTCTTGCTCAATGGCACAAAGTTTTGGATTTCCAATGGCGGATGGGCAGACATCATGACCGTGTTTGCCAGAACTGAAGTTGTTGACAAAGATGGTCAAAAGAAAGATAAGATCACAGCTTTCATTGTAGAGCGGGAGTTCGGTGGTGTCACCAGTGGCAAACCTGAAGACAAACTGGGCATCAGAGGCTCAAACACTTGTGAGATCTCATTTGAAGACACCAAGGTGCCAATCGAGAATGTTATTGGTGAAGTCGGTGGTGGTTTTAAGGTCGCCATGAACATTCTGAATAATGGGCGCTTCAGCATGGGCAGTGCAGGTGCAGGGGTGATCAAGAAGCTGATTGAGTTGACATCAGAATATGCAGGCACGAGAAAACAATTCAACAGGAGCCTTTCTGAGTTTGGAATGATTCAGGATAAGTTTGCTACTATGGCCATAAATGCGTTTGTGATGGAGAGCATGGCTTACCTCACTGCTGGAATGATGGACCGACCTGGAGTCCCAGACTGCTCTCTGGAGGCCGCTATGGTCAAGGTCTTCAGCTCTGAGGGCAGCTGGATCTGTGTGAGCGAAGCCCTGCAGGTTTTAGGAGGCCTGGGCTTCACCAAGAACTACCCCTATGAGCGCTACCTCAGGGACTGCCGTATCCTCCAGATATTTGAGGGCACTAATGAGATTTTGAGGATGTACATCGCACTTACAGGAATGCAGTATGCTGGCAAAATACTAACAGGAAAAATAAAGGAGATGAAGAAGGGAAATGTGGGGGTGGTGTTCGAGATTCTGGGAAAGAAATTAAAGGACTCAGTGGTGAAAACGGTGGACTTTGGACTGACCGGCAAAGATGGTGTTGTGCACCCCAGTCTGACGGAGAGCGCCAAAATGTTCGAGCAGAACGCTGCACTCTTCGGCTCTACTGTGGAAAGCTTACTGTACCGATATGGAAAGACAATCGTTGAGGAGCAGCTTGTGCTGAAGAAAGTTGCAGATGTATTAATTAACCTCTACGCCATGACAGCCGTCCTGTCCCGCACCAGTCGCTCCATCAGCATCGGCCTGCACAACCATGACCATGAGGTGCTGCTCACCAACACTTTCTGCAAGGATGCTCATTTCAAGAACAACTTCTTGTTGACTCAGCTTCAAAAAAATTCCCCGGAGAACAACGATGCCAACATAAAGAAGATCGCCCAGGAGGTCTTATCCAAGAGGGCGTATGTCTGCTCACATCCTCTGGACAGGACCTTT

Function

symbol description
acad9 Predicted to enable fatty-acyl-CoA binding activity and very-long-chain-acyl-CoA dehydrogenase activity. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 20. Orthologous to human ACAD9 (acyl-CoA dehydrogenase family member 9).

GO:

id name namespace
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K15980 ACAD9; acyl-CoA dehydrogenase family member 9

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03814414_03823373.mRNA True 1893 mRNA 0.48 18 3814414 3823373

Neighbor

gene id symbol gene type direction distance location
CI01000306_03784261_03805127 EFCC1 coding downstream 9287 3783605 ~ 3805127 (-)
CI01000306_03754616_03760572 ST3GAL8 coding downstream 53760 3754410 ~ 3760654 (-)
CI01000306_03655659_03655928 NA coding downstream 158486 3655580 ~ 3655928 (-)
CI01000306_03647554_03652331 UTP3 coding downstream 162083 3647554 ~ 3652331 (-)
CI01000306_03549983_03607948 FOXJ3 coding downstream 206466 3549983 ~ 3607948 (-)
CI01000306_03832463_03844882 IQSEC1, IQSEC1B coding upstream 9031 3832404 ~ 3844882 (-)
CI01000306_03905140_03924632 NA coding upstream 81633 3905006 ~ 3924911 (-)
CI01000306_04006646_04006936 NA coding upstream 182952 4006325 ~ 4008211 (-)
CI01000306_04218821_04226253 WNT7AA, WNT7A coding upstream 394626 4217999 ~ 4226253 (-)
CI01000306_04236542_04245309 PTPDC1 coding upstream 412059 4235432 ~ 4245309 (-)
G432288 NA non-coding downstream 31395 3778095 ~ 3783019 (-)
G432454 NA non-coding downstream 40958 3773221 ~ 3773456 (-)
G432452 NA non-coding downstream 42246 3771697 ~ 3772168 (-)
G432450 NA non-coding downstream 44229 3769753 ~ 3770185 (-)
G432318 NA non-coding downstream 66901 3743981 ~ 3747513 (-)
G432324 NA non-coding upstream 53994 3877367 ~ 3887196 (-)
G432321 NA non-coding upstream 92839 3916212 ~ 3922327 (-)
G432316 NA non-coding upstream 176336 3999709 ~ 4001906 (-)
G432458 NA non-coding upstream 195734 4019107 ~ 4019342 (-)
G432462 NA non-coding upstream 203958 4027331 ~ 4027591 (-)
G432022 NA other downstream 810523 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 2065464 1717933 ~ 1726043 (-)
G431814 NA other downstream 2501980 1311702 ~ 1312434 (-)
G431706 NA other downstream 2651076 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 3330765 482482 ~ 494090 (-)
CI01000306_04544349_04545034 NA other upstream 719350 4542723 ~ 4545244 (-)
G433450 NA other upstream 1538270 5361643 ~ 5383763 (-)
G433670 NA other upstream 2217641 6041014 ~ 6041283 (-)
G433985 NA other upstream 2372734 6196107 ~ 6197210 (-)
G434016 NA other upstream 2531807 6355180 ~ 6361643 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004163 acad9 coding NC_007122.7 CM002895.2 26685982 ~ 26701611 (-)