CI01000306_03655659_03655928


Basic Information

Item Value
gene id CI01000306_03655659_03655928
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 3655580 ~ 3655928 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_03655659_03655928.mRNA
ATGGCGCCGTCTGTATTTACCAGCGCAAATGGACTGATGCCGTCCACAACAGAAACAAAGCTCGCTGCTACTTTCTCAATACTTCATATCAGCACAGCACGTTTTAGAAATATGAAAACAACACCCACTGCACGGAAAGGAAGAGATGTCTGGCTAGCGTTTAAACAAAGCTATGTCGTCTGCTTGCAGCTCACAACCACCCTGCCTTCCATTAAGCGTATAAAACCACTGCATTTTTGCAAATGTCGAGTGTTGTGTATGGCTACATGAAATACATTGTGTGGACTGATGTACTTTGCATATTCTTACCGAAATTATTTGTCTTAACTGATCTTTTTAAAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_03655659_03655928.mRNA True 349 mRNA 0.40 1 3655580 3655928

Neighbor

gene id symbol gene type direction distance location
CI01000306_03647554_03652331 UTP3 coding downstream 3249 3647554 ~ 3652331 (-)
CI01000306_03549983_03607948 FOXJ3 coding downstream 47632 3549983 ~ 3607948 (-)
CI01000306_03520303_03535138 PRDM2B, PRDM2 coding downstream 120442 3520112 ~ 3535138 (-)
CI01000306_03477332_03500721 NA coding downstream 154683 3477260 ~ 3500897 (-)
CI01000306_03357647_03435533 KAZN, KAZNB coding downstream 220047 3357647 ~ 3435533 (-)
CI01000306_03754616_03760572 ST3GAL8 coding upstream 98482 3754410 ~ 3760654 (-)
CI01000306_03784261_03805127 EFCC1 coding upstream 127677 3783605 ~ 3805127 (-)
CI01000306_03814414_03823373 ACAD9, ACAD9.S coding upstream 158486 3814414 ~ 3823373 (-)
CI01000306_03832463_03844882 IQSEC1, IQSEC1B coding upstream 176476 3832404 ~ 3844882 (-)
CI01000306_03905140_03924632 NA coding upstream 249078 3905006 ~ 3924911 (-)
G432406 NA non-coding downstream 116857 3538502 ~ 3538723 (-)
CI01000306_03278833_03292888 PLCH2B non-coding downstream 362841 3278833 ~ 3292888 (-)
G432370 NA non-coding downstream 370798 3284499 ~ 3284782 (-)
G432308 NA non-coding downstream 378382 3231511 ~ 3277198 (-)
G432281 NA non-coding downstream 502621 3148940 ~ 3152959 (-)
G432411 NA non-coding upstream 17020 3672948 ~ 3673510 (-)
G432415 NA non-coding upstream 24891 3680819 ~ 3681256 (-)
G432416 NA non-coding upstream 27045 3682973 ~ 3683834 (-)
G432445 NA non-coding upstream 85579 3741507 ~ 3742163 (-)
G432318 NA non-coding upstream 88053 3743981 ~ 3747513 (-)
G432022 NA other downstream 651689 3000236 ~ 3003891 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 1906630 1717933 ~ 1726043 (-)
G431814 NA other downstream 2343146 1311702 ~ 1312434 (-)
G431706 NA other downstream 2492242 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 3171931 482482 ~ 494090 (-)
CI01000306_04544349_04545034 NA other upstream 886795 4542723 ~ 4545244 (-)
G433450 NA other upstream 1705715 5361643 ~ 5383763 (-)
G433670 NA other upstream 2385086 6041014 ~ 6041283 (-)
G433985 NA other upstream 2540179 6196107 ~ 6197210 (-)
G434016 NA other upstream 2699252 6355180 ~ 6361643 (-)

Expression


Co-expression Network