Gene
RNA
| Item | Value |
|---|---|
| gene id | G432445 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3741507 ~ 3742163 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496564 | True | 439 | lncRNA | 0.40 | 2 | 3741507 | 3742163 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_03655659_03655928 | NA | coding | downstream | 85579 | 3655580 ~ 3655928 (-) |
| CI01000306_03647554_03652331 | UTP3 | coding | downstream | 89176 | 3647554 ~ 3652331 (-) |
| CI01000306_03549983_03607948 | FOXJ3 | coding | downstream | 133559 | 3549983 ~ 3607948 (-) |
| CI01000306_03520303_03535138 | PRDM2B, PRDM2 | coding | downstream | 206369 | 3520112 ~ 3535138 (-) |
| CI01000306_03477332_03500721 | NA | coding | downstream | 240610 | 3477260 ~ 3500897 (-) |
| CI01000306_03754616_03760572 | ST3GAL8 | coding | upstream | 12247 | 3754410 ~ 3760654 (-) |
| CI01000306_03784261_03805127 | EFCC1 | coding | upstream | 41442 | 3783605 ~ 3805127 (-) |
| CI01000306_03814414_03823373 | ACAD9, ACAD9.S | coding | upstream | 72251 | 3814414 ~ 3823373 (-) |
| CI01000306_03832463_03844882 | IQSEC1, IQSEC1B | coding | upstream | 90241 | 3832404 ~ 3844882 (-) |
| CI01000306_03905140_03924632 | NA | coding | upstream | 162843 | 3905006 ~ 3924911 (-) |
| G432416 | NA | non-coding | downstream | 57673 | 3682973 ~ 3683834 (-) |
| G432415 | NA | non-coding | downstream | 60251 | 3680819 ~ 3681256 (-) |
| G432411 | NA | non-coding | downstream | 67997 | 3672948 ~ 3673510 (-) |
| G432406 | NA | non-coding | downstream | 202784 | 3538502 ~ 3538723 (-) |
| CI01000306_03278833_03292888 | PLCH2B | non-coding | downstream | 448768 | 3278833 ~ 3292888 (-) |
| G432318 | NA | non-coding | upstream | 1818 | 3743981 ~ 3747513 (-) |
| G432450 | NA | non-coding | upstream | 27590 | 3769753 ~ 3770185 (-) |
| G432452 | NA | non-coding | upstream | 29534 | 3771697 ~ 3772168 (-) |
| G432454 | NA | non-coding | upstream | 31058 | 3773221 ~ 3773456 (-) |
| G432288 | NA | non-coding | upstream | 35932 | 3778095 ~ 3783019 (-) |
| G432022 | NA | other | downstream | 737616 | 3000236 ~ 3003891 (-) |
| CI01000306_01723684_01726043 | MAFGA, MAFGB, MAFG | other | downstream | 1992557 | 1717933 ~ 1726043 (-) |
| G431814 | NA | other | downstream | 2429073 | 1311702 ~ 1312434 (-) |
| G431706 | NA | other | downstream | 2578169 | 1163027 ~ 1163338 (-) |
| CI01000306_00482506_00494090 | PFKLB, PFKL | other | downstream | 3257858 | 482482 ~ 494090 (-) |
| CI01000306_04544349_04545034 | NA | other | upstream | 800560 | 4542723 ~ 4545244 (-) |
| G433450 | NA | other | upstream | 1619480 | 5361643 ~ 5383763 (-) |
| G433670 | NA | other | upstream | 2298851 | 6041014 ~ 6041283 (-) |
| G433985 | NA | other | upstream | 2453944 | 6196107 ~ 6197210 (-) |
| G434016 | NA | other | upstream | 2613017 | 6355180 ~ 6361643 (-) |
