Gene
RNA
| Item | Value |
|---|---|
| gene id | G432370 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000306 |
| NCBI id | null |
| chromosome length | 11491657 |
| location | 3284499 ~ 3284782 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU496484 | True | 284 | lncRNA | 0.40 | 1 | 3284499 | 3284782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000306_03258305_03268722 | BRPF3A | coding | downstream | 15777 | 3257223 ~ 3268722 (-) |
| CI01000306_03086600_03106758 | HCFC1B, HCFC1A, HCFC1 | coding | downstream | 176284 | 3086510 ~ 3108215 (-) |
| CI01000306_03070842_03073585 | GATA1A | coding | downstream | 210865 | 3070578 ~ 3073634 (-) |
| CI01000306_03044394_03045362 | NA | coding | downstream | 238294 | 3043376 ~ 3046205 (-) |
| CI01000306_03006241_03009198 | NA | coding | downstream | 275143 | 3006190 ~ 3009356 (-) |
| CI01000306_03296768_03330783 | SKIA, SKIB, SKI | coding | upstream | 10941 | 3295723 ~ 3330783 (-) |
| CI01000306_03334185_03336292 | NA | coding | upstream | 49050 | 3333832 ~ 3336292 (-) |
| CI01000306_03357647_03435533 | KAZN, KAZNB | coding | upstream | 72865 | 3357647 ~ 3435533 (-) |
| CI01000306_03477332_03500721 | NA | coding | upstream | 192478 | 3477260 ~ 3500897 (-) |
| CI01000306_03520303_03535138 | PRDM2B, PRDM2 | coding | upstream | 235330 | 3520112 ~ 3535138 (-) |
| G432308 | NA | non-coding | downstream | 7301 | 3231511 ~ 3277198 (-) |
| G432281 | NA | non-coding | downstream | 131540 | 3148940 ~ 3152959 (-) |
| G432282 | NA | non-coding | downstream | 144618 | 3138791 ~ 3139881 (-) |
| G432285 | NA | non-coding | downstream | 146767 | 3137285 ~ 3137732 (-) |
| G432280 | NA | non-coding | downstream | 158545 | 3123477 ~ 3125954 (-) |
| CI01000306_03278833_03292888 | PLCH2B | non-coding | upstream | 954 | 3278833 ~ 3292888 (-) |
| G432406 | NA | non-coding | upstream | 253720 | 3538502 ~ 3538723 (-) |
| G432411 | NA | non-coding | upstream | 388166 | 3672948 ~ 3673510 (-) |
| G432415 | NA | non-coding | upstream | 396037 | 3680819 ~ 3681256 (-) |
| G432416 | NA | non-coding | upstream | 398191 | 3682973 ~ 3683834 (-) |
| G432022 | NA | other | downstream | 280608 | 3000236 ~ 3003891 (-) |
| CI01000306_01723684_01726043 | MAFGA, MAFGB, MAFG | other | downstream | 1535549 | 1717933 ~ 1726043 (-) |
| G431814 | NA | other | downstream | 1972065 | 1311702 ~ 1312434 (-) |
| G431706 | NA | other | downstream | 2121161 | 1163027 ~ 1163338 (-) |
| CI01000306_00482506_00494090 | PFKLB, PFKL | other | downstream | 2800850 | 482482 ~ 494090 (-) |
| CI01000306_04544349_04545034 | NA | other | upstream | 1257941 | 4542723 ~ 4545244 (-) |
| G433450 | NA | other | upstream | 2076861 | 5361643 ~ 5383763 (-) |
| G433670 | NA | other | upstream | 2756232 | 6041014 ~ 6041283 (-) |
| G433985 | NA | other | upstream | 2911325 | 6196107 ~ 6197210 (-) |
| G434016 | NA | other | upstream | 3070398 | 6355180 ~ 6361643 (-) |
