CI01000306_09049143_09051379 (CYB561D1)


Basic Information

Item Value
gene id CI01000306_09049143_09051379
gene name CYB561D1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 9049143 ~ 9051848 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000306_09049143_09051379.mRNA
ATGCCGCTCGGGATGCGCCCGTCGTCGGATGTGGAGTACAGTGCGGTTGGAGAGGGGCTCGGGATGCGGGACTTCTGGCTCTATGTGTGGCTGCGCAGAGTGTCTGTGGTCGCTGCGCACATCATTTCACTCGGCCTGTTTATTCTCATATCCATACTGTCCAGACCAGGAACAAGTCTCTTCTCTTGGCATCCTGTCTGCATGTCACTTGGGTTTTGTCTGTGCATGACAGAAGGGATCCTACTTTTCTCCGCTGAGGGCACCCCGTTCTGCTTCAAATCCCGTAAGTGGAAGGTCCGTCTGCACTGGTTCTTTCAGGCCCTGCTGCTGGTGTGTGGCGCTACAGGATTCTGCTTCATGGTGGCCAGTAAGAACATAAAAGAGAATTCGCACTTTACTTCCTGGCACAGCCTGCTGGGACTCACTACGATGGCTGCTACTGTGCTGCAGGCGATATGTGGCGTCGTTCTCCTGTTCCCTAAACTCATCAGCACTTACTCGTTTTCTCGGTGGAGATTGTATCATGCCACCTGTGGCCTGGTGGCCTACCTGCTTGCCACCATCACGGTCATGTCAGCCATGTTTACAGACTGGTTTCAGGCTTCGGTGACAGGCATAATCTGGTATATCTTCCTACTCCTCCCACTTTTTCCTGCCTTAGTGGTGATGAACCAAATCACTAGTGCCTTCCTGCCCAAAAAGAAGATTACTAGTTGAAAACTAAAGCCTCAAATTAAAGCCTTATTTAGGGATCTGGGGCCTCATTTATAAAGTTCCCTAAATGGGAACATACAACAATTTCCTAAATGTTCCTACGAATGTTTTATAAAATGTCCATATGCACAAAAAAGGTTCCTAATTGCATCGCACTTTATAAATCACGCTCATCATCATGGGCAAGTGTGCGTATATATACACATGACAACTCTCTGAATAGATTTAACCAGCATTTATTAATAAGAATGGTATGTACATAGGTTTAGTCTTGGCAGATTAGATCTGCCACGCTGCTGCATGAGTGAAAGCTACTGCTGAAACATGCGCATAAATACGCAGAATAGAATGCAAGCTGCTGCAAGGGAAGTAGGGAGAACCCCCAGATCTAGGCAGGTGGTGCTGGGGAGGGAGGAGGGCTAGGAAAATTCCCATGGCGCGATGCACTGAGTTGAGCCTGTTCGGGACTGAA

Function

symbol description
cyb561d1 Predicted to enable heme binding activity and oxidoreductase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human CYB561D1 (cytochrome b561 family member D1).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000306_09049143_09051379.mRNA True 1186 mRNA 0.48 3 9049143 9051848

Neighbor

gene id symbol gene type direction distance location
CI01000306_09034546_09046916 ATXN7L2, ATXN7L2A coding upstream 2199 9034439 ~ 9046944 (+)
CI01000306_09021191_09031657 SYPL2A coding upstream 17486 9021059 ~ 9031657 (+)
CI01000306_08984163_08984476 NA coding upstream 64439 8984163 ~ 8984704 (+)
CI01000306_08973033_08975478 NA coding upstream 72335 8973033 ~ 8976808 (+)
CI01000306_08966130_08967440 NA coding upstream 80967 8965102 ~ 8968176 (+)
CI01000306_09081250_09087963 LDLRAD2 coding downstream 29402 9081250 ~ 9088398 (+)
CI01000306_09125548_09137714 NA coding downstream 73203 9125051 ~ 9137754 (+)
CI01000306_09141075_09152779 NA coding downstream 89054 9140902 ~ 9152819 (+)
CI01000306_09155525_09189777 NA coding downstream 103502 9155350 ~ 9190162 (+)
CI01000306_09195793_09213433 NA coding downstream 142369 9194217 ~ 9214865 (+)
G435409 NA non-coding upstream 178266 8870560 ~ 8870877 (+)
G435408 NA non-coding upstream 178760 8870176 ~ 8870383 (+)
G435345 NA non-coding upstream 179319 8868477 ~ 8869824 (+)
G435407 NA non-coding upstream 187892 8861002 ~ 8861251 (+)
G435406 NA non-coding upstream 188265 8860662 ~ 8860878 (+)
G435438 NA non-coding downstream 37207 9089055 ~ 9089347 (+)
G435446 NA non-coding downstream 67327 9119175 ~ 9119512 (+)
G435447 NA non-coding downstream 98072 9149920 ~ 9150238 (+)
G435451 NA non-coding downstream 106604 9176768 ~ 9177266 (+)
CI01000306_09216004_09219290 NA non-coding downstream 167199 9215829 ~ 9219563 (+)
G434545 NA other upstream 1929284 7119317 ~ 7119859 (+)
G433724 NA other upstream 2919365 6108611 ~ 6129778 (+)
CI01000306_06106248_06107449 GM2573, CS056, WDR83OS other upstream 2940968 6106143 ~ 6108175 (+)
CI01000306_05976516_05985251 TMEM178A, TMEM178 other upstream 3062855 5975822 ~ 5986288 (+)
G432958 NA other upstream 3388974 5658928 ~ 5660169 (+)
CI01000306_09225597_09230504 NA other downstream 173717 9225512 ~ 9231333 (+)
CI01000306_09263755_09288503 NA other downstream 222051 9263589 ~ 9289035 (+)
G435590 NA other downstream 661001 9704707 ~ 9737144 (+)
CI01000306_09860935_09865155 SH2D5 other downstream 808365 9860480 ~ 9865724 (+)
G435639 NA other downstream 828072 9878664 ~ 9884919 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003600 cyb561d1 coding NC_007122.7 CM002895.2 36408636 ~ 36415700 (+)