G432161


Basic Information

Item Value
gene id G432161
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000306
NCBI id null
chromosome length 11491657
location 2688458 ~ 2691958 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU496237
ATGAGCATGTTATGGGCCTTTTCTTCCCAGTGTTCACAGACAGTGAGCAGCTCCTGCAGGCGGGCCATGGTTCTTTCCACACAGGAGTGCGGTGCCAGGCCCACTCCTTGATCTATGAGCCTCCTCATGCAGTCTAGACTGAGGTCGGCCGGCTGATCGCTGGCTTCCTGAACAGCCTCCACCCAGCGTGCCTGCTCCAGCCTCTGCCTCAACACCGCCAGCTGAGGCAACTCCACATCCAAGGCTGCGCCTTCATCCAGGAGGCCTTGGAGGGCAGAGGAACCAGGCATGTCCTCTGCAAGGAGATCCGAGCTCTGCTGCTGGAACTGTTCAACGCGGTTCAAAAGAGCCTGAGATGGAGGTAGAGGGAGAAAATGTCAGATCAACACATCTGGGAAAACTAGGAAAATTAGACTTAGCATGTTGTGTGGTTGGTTACCTTTAAGAAAGGGGCCTGTCGGATGGTACAAGGCAGGTCATACAACTGATTGACAAACGACTTCAGTTCCTCCACCGTGAGCTGATTTTGAGACTTTCCCCCACCGGAGCGATACCTAGTCTGTCTCTTGCCATTGAGGAGTTGTTGGGCCATTGAGGTGCACCTATCTGCATTCTGGATCACTTGACGCAGGTGACATAGCAGGTCAGTGTCAGGGTACATCTTCTTCTCTGCTTCTACTACCAAGGAACGAAGCTCCTCCAAATCACTTTTATTGTCTTGATCTGCTTTCAAAATCTTGTTAACTTTAGATGCCCAGTCTTCATAGGACTCAGCACGAGCTGTCAAAGCCTGGAACAATGGCTTCAGTTCGGCAAGTGTGTATTTATAGTTGAGCGTGTAGCTTCTAGCAGGGCAAGAGCAGAGGTCCTGGATGTGGTGGAGACAGACCAGCTGGTCGGGGCTACAGGGACAGGTGATGGCAGACAGGTAACAGGTGGTCCGGCACTTAGCACACTGCCTTTCCTCATCTGGCAGTATATCATAGTCAACCTGCTGGGAGTGCCACACGCCCAGCTTATAGGCTCTCTCACGGAGCATCTTCTCCTCCAAAATCATGGCACACATGTCCTTCTGGACAGCAGAGGCCAGTTCCAACTCTAGACTGTCTGCCTTGGCGGCAATGTTACAGGTCATTTCATCGTGGGAGAAAACACAGTATCTGTTGAGGGATCGGTAGTGCTCGACACACTGTCGACCAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU496237 True 1203 lncRNA 0.52 5 2688458 2691958

Neighbor

gene id symbol gene type direction distance location
CI01000306_02601172_02604783 OLFML3B, OLFML3 coding downstream 83675 2601000 ~ 2604783 (-)
CI01000306_02485219_02510419 PLEKHG5A coding downstream 178039 2485131 ~ 2510419 (-)
CI01000306_02455495_02470846 NA coding downstream 217612 2454988 ~ 2470846 (-)
CI01000306_02443217_02444650 NA coding downstream 243365 2443001 ~ 2445093 (-)
CI01000306_02407441_02437462 DVL1B, DVL1 coding downstream 250299 2407421 ~ 2438159 (-)
CI01000306_02919027_02938762 MYH7B, MYH7BA, MYH7BB coding upstream 226930 2918888 ~ 2938762 (-)
CI01000306_02966994_02968675 SNAI1A coding upstream 273979 2965937 ~ 2969186 (-)
CI01000306_03006241_03009198 NA coding upstream 314232 3006190 ~ 3009356 (-)
CI01000306_03044394_03045362 NA coding upstream 351418 3043376 ~ 3046205 (-)
CI01000306_03070842_03073585 GATA1A coding upstream 378620 3070578 ~ 3073634 (-)
G432145 NA non-coding downstream 44647 2640042 ~ 2643811 (-)
G432126 NA non-coding downstream 96936 2574721 ~ 2591522 (-)
G432122 NA non-coding downstream 118752 2568985 ~ 2569706 (-)
G432117 NA non-coding downstream 131553 2556660 ~ 2556905 (-)
G432061 NA non-coding downstream 278073 2409106 ~ 2410385 (-)
G432154 NA non-coding upstream 5482 2697440 ~ 2698737 (-)
G432153 NA non-coding upstream 48983 2740941 ~ 2742273 (-)
G432173 NA non-coding upstream 51175 2743133 ~ 2743851 (-)
G432196 NA non-coding upstream 66501 2758459 ~ 2758759 (-)
G432032 NA non-coding upstream 184415 2876373 ~ 2881733 (-)
CI01000306_01723684_01726043 MAFGA, MAFGB, MAFG other downstream 939508 1717933 ~ 1726043 (-)
G431814 NA other downstream 1376024 1311702 ~ 1312434 (-)
G431706 NA other downstream 1525120 1163027 ~ 1163338 (-)
CI01000306_00482506_00494090 PFKLB, PFKL other downstream 2204809 482482 ~ 494090 (-)
G432022 NA other upstream 308278 3000236 ~ 3003891 (-)
CI01000306_04544349_04545034 NA other upstream 1850765 4542723 ~ 4545244 (-)
G433450 NA other upstream 2669685 5361643 ~ 5383763 (-)
G433670 NA other upstream 3349056 6041014 ~ 6041283 (-)
G433985 NA other upstream 3504149 6196107 ~ 6197210 (-)

Expression


Co-expression Network