CI01000308_00750618_00755764


Basic Information

Item Value
gene id CI01000308_00750618_00755764
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 749787 ~ 756480 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000308_00750618_00755764.mRNA
ACTAACCACTGCATACATTAAAGAATATAGTCACAGATATGCATACGAAACCGCACGTGCATAGTCACATGTCGATATGCAAACATACCTGTAGCTCAGCATTGAGAATCAACAGTTCTTTTTGATTAGAAAAAGTGTTAATCACAAACAGTAATAGCTTAATAAGCTATTACTAACAAAACTTTCCTTTTGAAAATACCAAGAAAAAATATGATAACTCTGGTACTCTCCCTAATTAGTGAGTGCACTGGTATTTCCCTCTACATTTGGAATAATTAACATGTATTTATACATTCACACATTTACATTGTATTTTTTTTTTTTTTTGTTCTATGTATACACATGCTCATGTACAAGGCTACAGTTTGCACACTTGATGCTACGTGTATAACCACAAGAGAGAGAGAGAAAAAAACATGTTGCTATCTTAGAGTGGGGGAAATATCTGCCATCACGGAAGACTGACTGAAGCAAAACAGACAGAGGGGAAGTTCACAGTACAAATACATAGAGAGTCAGTCAACCACTCAATCTCACACTCACATGAGAGCTGTACGGACGGAACTGAAGAGTAACTGAACAGCCAGCTGGCTCTGTTAAAACGGTTATTTGGTTAGTAGGAACACTGTGTGGTGATATTGAGTTTTTGTGTGTGTGTGTTCGTATGGAACTGGACTGGAAGTTATTGTTGGATATGATGATTAACTGACATAAACATGGATCGGACCTTATGGATTTCTTTTCTGGTCACATTGATGCACATCCCGGGTTATATTGCAGGTGAGGTGATTGAATTTGACATATGGGAGGGAAATGTCACCGTGCTCTGGGATCCCCCTGAAGGAGCCCCCGTACATGCCCTTTATCAAGTAAAGCAAGCACCGTATTTAGGTACTCATGCTGAATGGGATATTGTGCCAGAATGTAACATGACTACAGAAACTAGATGTGAACTTGGGAACTTTTTATTCAAACCAGAAATGAAAATAAAGATTGAACTGCTTGATGGAAATGGCAACTTTTCCTGGTCAGAAGTAAGAAGAATTCGCTTATATCAGAGCAAACTGTTAGCTCCAGAGTTTGACCTGTCTTCCACCACTAATATGGTGAAGGTTAAAATTCACAGAAAGCCATATCTAGAAGACCTTTTTAACTTTGGACCAAGTTACTCTGCCATTCTGTATCCGAAAGGACAGGAGAGCGAGGCTATAACAATAAGCGATGATGATGATGAAGATGGTGAGGTGGTGTTTACATCATTACCATTATGGCAGGAGTATTGTGTCCGTGTGAAAGTGGAGATGACATCTAATGATGTGAGCAACACCTCATTACCACGCTGCATATATCCATCAGCAGATATGTCTCTGGTGATCTCCATGGCATTTGTTGGTGTAGTTGGAGTTATGACCTTCTTCATGTTTGCAGTCTGTTTCTTCCTGAGGCGTCCTGGTAAAATGCCTGCTGTTCTGAAATCCGCTGTGAATGGATGGCACCCTATGAATGTAGGATTGATCCAAGTGGAAACAGTCACTGACAAGGGATGGCTACTGACTAGCAACAAAATGGCGGGAACGAGTAAAGCATTTGTTGAGGACATGGACCTTTCTGATGAGGACAAAGAGAGAAGAGAAAGTACAGACAGCGGAGTGAGTGTGGGCCAGCAGCACTCGCTTAAGAACAGAGGCACAGGCGAACATACGAGAGAGGAGGACAGCGGCTGTGGCAGTCTGACAGGAACAGAGGACAGTCTCAGCAGTGGAAGAAGAAGCCTGGAAGAGCTCCCTTTCCTGGACGGAGGAGTAAATAGCAGCAACGGAGAAAGAAAAGAAGACAGTGGCTTGGGAATAGGAAACCAGGATGATTCCGGCAATCTCAATGGTGCGGATCATGACCTTCTGTCTGAGATAGTAGTTGTTGGGGATGGATATCGTAGTCAGAGCCCTTCTGCTGATGCTGAAAGTGAGGCGGCCGTCTCATGTGATGTAAACACTACAATGGCCAGCCCTAGCTGTGGCTATCGGTCTGGTCATGTGACGTGCTTGTGTTCTGACTTTGAGACTTGCATTTGGTGCAAAACCAGGAAACAGGAAGCAGACAGTGAGTCATTATCTCATGATCAACCAAGTAATTTTACAACCGAAAATGACAATGACAGACCAAACTATTTGAAAAAATCTCCTCTACACACCTTGAATGTGTCAGGACTGGGAGATTTGTCCTTCCAGTCAGATGAGAACTGCACTGAGTCGTCGCTTTTCATTACCTGTCCACTACTTCTGCAAGAGCCCTGCCAAATGGACAATTTGTCTCTTACATTAGGAGACTTTGAACTGACATTCACGTGAGAAATAAGACATTTTCATGAATGTGTAAGCAAATATGAGCTGAACAAAGCATATCTGCGTCTCCTCCTGCTGTTTGCTCCAGCGGACGTGCATTTTTTGTTTAGAGTAACAGCAGAGAGAGAGTATGTGCTAAATATGGCTGTGTCACTAATAATGGGCCCTCTGAAGTGAGGCTGTCCCTCAGAAGTATGACTTCCTGCAAGCTTCAGGTCATCATTTTGCCTAAATGCTGGACAAAGAGGAGATATTCAAGTTTAAAACTGAGTGACCAAGAATGGGATACTACCCGAATATGATGACGTTGAGCTATTACAGTTCTTGACGTCTAATGTTACACATCCCATCCAGCTGAAATACTGTAGTTCCTTTATATACTTGTGTTCTTCTTTTGCAGTTTTGCACATGAATTGTATGTATTTACATTTTATGTACGTATCTACTGACATTTTTGATATGCCGAATTTTGAACAACAGCCAACATTTCATTGTGGGGCCAATGTAAGCACGATATGGGATTGAAGTATGGGCCCTACATGGGTTTGCTCTTTGGTTCCATGTCGGACTTATCTGAATTAGCCCCAGTATGAGCCCCAAATGAGTTTGTTGATGGGTTTGATGTCGGCCCTATCTGAATTAGACCCAGTATGAGCCCCAAATGGGTTTGTTGATGGGTTTGATGTCAGCCCTATCTAATTTAGCCCCAGTATGGGCCCCAAATGGGTTTGTCAATGGGTTCCATGTCGGTCCCATTTGAGTCCCACCTTGAAATGTTGGCTGGTGTGATGGAATGATGGTAAAGATGATGATGATGATGATGATGATAAAAATAAA

Function

NR:

description
Crfb7 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000308_00750618_00755764.mRNA True 3179 mRNA 0.42 7 749787 756480

Neighbor

gene id symbol gene type direction distance location
CI01000308_00711286_00720426 NA coding downstream 29075 711216 ~ 720712 (-)
CI01000308_00529728_00530015 NA coding downstream 219642 529618 ~ 530145 (-)
CI01000308_00474123_00482394 NA coding downstream 266323 474064 ~ 483464 (-)
CI01000308_00110535_00111604 NA coding downstream 638129 109601 ~ 111658 (-)
CI01000308_00041387_00048067 NA coding downstream 701534 41347 ~ 48253 (-)
CI01000308_01027964_01028971 GPR184 coding upstream 269365 1025845 ~ 1028971 (-)
CI01000308_01060962_01079388 PRKD2 coding upstream 304399 1060879 ~ 1079388 (-)
CI01000308_01085455_01103053 NA coding upstream 328467 1084947 ~ 1104480 (-)
CI01000308_01110508_01122419 STRN4 coding upstream 353991 1110471 ~ 1122932 (-)
CI01000308_01138943_01149474 SLC1A5 coding upstream 382102 1138582 ~ 1149735 (-)
G438344 NA non-coding downstream 2050 747522 ~ 747737 (-)
G438343 NA non-coding downstream 2363 747219 ~ 747424 (-)
G438341 NA non-coding downstream 7539 742026 ~ 742248 (-)
G438336 NA non-coding downstream 14643 734777 ~ 735144 (-)
G438302 NA non-coding downstream 80002 657083 ~ 669785 (-)
G438355 NA non-coding upstream 12502 768982 ~ 786301 (-)
G438309 NA non-coding upstream 54975 811455 ~ 817293 (-)
G438377 NA non-coding upstream 71257 827737 ~ 828084 (-)
G438352 NA non-coding upstream 77691 834171 ~ 834437 (-)
G438408 NA non-coding upstream 137520 894000 ~ 1234055 (-)
G437635 NA other downstream 614102 135308 ~ 135685 (-)
G438434 NA other upstream 191076 947556 ~ 957849 (-)
G438671 NA other upstream 1021115 1777595 ~ 1782581 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008354 il10ra coding NC_007126.7 CM002899.2 12377887 ~ 12388434 (+)