CI01000313_01653800_01671609 (ABCH1)


Basic Information

Item Value
gene id CI01000313_01653800_01671609
gene name ABCH1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 1652402 ~ 1671609 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000313_01653800_01671609.mRNA
AGATTGGAGAGCAGGACTATGAAGACTGACTTGGAGACAGGGAGTTGCAGCGCTGCAATCCACTGTCATGATGTGTGTCGCTCATATGGGAAATTTAAAGTCCTCAACAGTCTCAACCTGAGTGTACCTCAAGGCCAAATTTATGGGCTGCTGGGACCAAGTGGCTGTGGGAAGACTACGTTGTTGAAATGCATTGTGGGAACTCTGAAGATCTCTCATGGTCATATCACAGTGCTGGGGAAACCACCAGCTTTCCCAGGACATGAAGTCCCAGGAAGGATGGTGGGATACATGCCACAGGACATTGCTCTGTACAATGAGTTCACTATCAGCAACACACTATGGTTTTACGGTCGAATTCACGGCCTTTCATCTAAAGAAACAGAAGCCAGGATTAATTTCCTCATCGACTTCCTAGACCTGCCACAGAAAAACAGCCTTGTGAGAAATCTCAGTGGAGGCCAGCGCCGGCGTGTTTCTCTCGGAGCTGCTTTGCTTCAGAACCCACAACTTCTGATCCTGGATGAGCCCACTGTGGGAGTGGACCCTGTTCTGCGCTCCAAGATATGGCAGCACCTGGTGGACATTGTAAGAGGAGGACAGGTGTCCGTCATTATTACAACGCATTACATTGAGGAGGCCAGACAAGCCAATACAGTGGGTTTGATGAGGAATGGTCGATTGTTAGCTGAAGGTCCCCCAGACACTGTTATGAAGCAACACAATGCAGCAACTTTAGAGAGTGCGTTCTTGCAACTTTGTGAGGACTTTGATCAGATGGGCACCAAACAGAGTCCGCAGGGCCATCTACTGGACAGCAGCCCATCTCCAGACAGTATGAGAGATGAAAGCAGAGAGCCCATACTGAGAAAGAGCACACCAGAAGACATACCTAAATATAAAGCTGACTGGAAAGTGCAAGCCAGACACTTCATACCAAAATGGCGCAACATTGCAGCGTTGATGATCAAGACGATGGTTCGAATGAGAAGAATGCCAGGGTCCCTCTGTTTCCAGTTTCTTTTGCCTGTAATTCAGATCTGTCTGATGTGCCTGTGTATTGGTGGAGACCCCAAAGGAATTGACGTGGCTGTGGTCAATAATGAAAGTAGTCCCAGTGCCTACAGTAGGACGTTGCTGTCCTTCCTTGACAACACAAGTATCCACCAAGTGAACTTGTCTCATTCTAAAGCTTTTGCTGGTATCCATAATGGGGAATACTGGGGCGTCATAGAGTTTGGGGAGAATTTCACCAGCTATCTAACAAAAAGGATGTTGCAGCCCAGAGTCTCCAAAGATGTGGTTGAGGGAGGATCTGTGCATGTTTGGCTGGACCTGACCAACCGACAGGTTGCCCTAATGCTACAGAAAAAACTCCATGAGGCCTTTGAGGCTTTTATTGAGACAAAGCTGGGGAGTTTGTCTTACATGGTGGCTGTCCCTATAAAATTTGAAAAACCTATATATGGCAGTGAGAACACAGATTTCACTACGTTTGTGACGCCAGGAGCTGTTTTGAGCATCACATTTTACCTGGCAGTGGGGTTGACCGCTCTGTCCTTTGTGTTGGAGAGAAAGGAGGGGCTGCTGGACAGGTGCTGGGTGGCAGGTGTAAGTTCTCTGGAGACCATGCTGGCTCACCTCTTCTCACAGCTGTTTGTCATCAGTGTTCAGATAATCCTTCTGCTGATCTTCATCCTGCTGATCCCTAATGAAGGATCTCTGGCTTTGGTGATCTCATTGATCGTGCTGCAGGGAGTGACCGGAATATCCTTCGGGCTAGTCATCTCCTCTGCTATCGATGACGAGCAGTCGGCCAATCAAGCAGCTCTTGGAATCTTCTACCCCAACCTCATCATTAGTGGTGTTATCTGGCCAGTTGAGTGTATCCCGTATCCTCTGCGTTATTTGAGTCTAGTCCTGCCCCAGACCTATGCATCTGAAGCCCTGCGCTGCATCATGTACAGAGGTTGGGGTCTGTCCCGTATGATGGTTTGGCGAGGCTTTGCAGTCACTCTGGGCTGGAACACATTCTTCCTTATGCTAGCAACGATCATTCTTAAGCTGAGAACATGAGAGGCTCTACCTGAGGAAAGGTGCTTCAGATTGGGTATAGTGGTGTCCGGCACGGACAAAAAATGATTGACACGTTGAATTGCCAATCTGAGCCCCTCTGAGCCTCTCTCTCCTTTAATACGCCATTCACCCTAAAGGACCCGAGGACCACCAGCGTGAAACTCAGGGCATTTCTCAACCAGATAAGAGAACAATTCAACAAACTATTCCAGTTTCTGTCAAGTTTACCATCTTCTGCCATCTTCTGCTGACAATGTGATGCTTAACGCTCATCGTGAGTTTCACATGGGCTTCAGTTATTTTAAACATCCATCAAAGAAGAAAGAAAAGTGTTGAAGCCTACTGTTGGAACTTTCCATACTCTCTTCTTTTTCCCCCCTGGATTATGTAATGCATCCTGAATTCACTGACTAGGTTCTGCATGCCTGAGTTTCTTAGGGTGCATCTTAGTCAGCTCCCTAGTTCAATAGTCAAGGCACTGATCAGGGAGTCGGCCATTTTAAGCGCTGTCTCAATCTCAAAATCCTTCCAGTGGACTGAAGCATTCGCTCCCCAAAAAGTCCCACATTGCTCAGTGAAAACCAGGGATGTGTCACTATACCGGAAACATTTATAATAAATTACAGCTAAAATGTTGCTGGGATATGTAAAAATCAAAGTATTAATCATAAACTTTTAAATAACAATTGATGTCAGAAAGATATCTGTGCTGCTGTTGTTCATAAATGTCAGTAGTGATGTTGTACATCGAGAGCGTTGCCATGTCTTGAAATAGAGCCATCAATGTCCAAATTTGTAGCGAGTCAGGGTCCTTACCAGTGCCCGAATTTGTGAACACGATAAACTGATTAATGCCCTAGGGAGCTGATTGAGACGCACCCTTAGTGTATGCTCCATATGCCTTTTCTCTGCCAGTAAACCTTAGATTGGGTACAATCAGACATCTAAATTTCTTTGGTGAAGCCTACAATGTTGCCCACCCTCATACCCCCTCATCCTAAACAGAAAGAACACTGCTTAGCGAGGATTCTTCTCTGGGCACGATTCGCCCTTTGCATTGTAGTGTTTTTGATTTTCCAAACTGCTGCTTGTTCATTGTTTTGTTTTTTATTAATGATAAATGTTTTTAGATTAGCAGCCTGGGTATTAATTTATCAAGTGCCATAAAGAAAATGAAGGAACAATGACAATGTTTACATTTGAGCACATAGCAGGCCAAAGTTAAACCTGCAAGTTGAACTGAAAAGACAAGTTTAGTCTCGTATTTTAGTACATAATATATTTGAACAACAACACAAGCTGCATTACAATGTAAGCCATATGCTGAGTTACTTGGAATGGTGAGAATAGTTTGATGAATATTTTAGTGTGCAATATTTGACAAGGAGAATGAATAAA

Function

symbol description
abch1 Predicted to enable ATP binding activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of ATP-binding activity cassette (ABC) transporter complex. Is expressed in brain; gill; liver; pleuroperitoneal region; and skeletal muscle.

NR:

description
ATP-binding cassette sub-family H member 1

GO:

id name namespace
GO:0006810 transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000313_01653800_01671609.mRNA True 3474 mRNA 0.45 19 1652402 1671609

Neighbor

gene id symbol gene type direction distance location
CI01000313_01616695_01623806 PELI1, PELI1B coding downstream 28596 1615403 ~ 1623806 (-)
CI01000313_01602067_01603268 NA coding downstream 49134 1601744 ~ 1603268 (-)
CI01000313_01502545_01526050 WDPCP coding downstream 126352 1502545 ~ 1526050 (-)
CI01000313_01249763_01250659 NA coding downstream 401743 1249631 ~ 1250659 (-)
CI01000313_01140265_01183820 PDZD8 coding downstream 468073 1139036 ~ 1184329 (-)
CI01000313_01677464_01683934 NA coding upstream 4889 1676498 ~ 1683934 (-)
CI01000313_01704439_01705320 DYNLT1 coding upstream 32721 1704330 ~ 1705320 (-)
CI01000313_01757085_01758655 NA coding upstream 85476 1757085 ~ 1758961 (-)
CI01000313_01759780_01760685 MORN2 coding upstream 87632 1759241 ~ 1760685 (-)
CI01000313_01771461_01775597 NA coding upstream 99789 1771398 ~ 1775597 (-)
G445184 NA non-coding downstream 46952 1605148 ~ 1605450 (-)
G445183 NA non-coding downstream 48138 1603938 ~ 1604264 (-)
G445134 NA non-coding downstream 91801 1560107 ~ 1560601 (-)
G445148 NA non-coding downstream 94803 1557383 ~ 1557599 (-)
G445128 NA non-coding upstream 43346 1714955 ~ 1716525 (-)
G445203 NA non-coding upstream 61451 1733060 ~ 1733750 (-)
G445216 NA non-coding upstream 127435 1799044 ~ 1799273 (-)
G445233 NA non-coding upstream 157905 1829514 ~ 1831311 (-)
G445239 NA non-coding upstream 168203 1839812 ~ 1840023 (-)
CI01000313_00982839_00997272 NA other downstream 663110 982829 ~ 997590 (-)
G444714 NA other downstream 1252306 397607 ~ 400096 (-)
G444653 NA other downstream 1278938 371520 ~ 373464 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012110 abch1 coding NC_007128.7 CM002901.2 24537185 ~ 24564677 (-)