CI01000313_01602067_01603268


Basic Information

Item Value
gene id CI01000313_01602067_01603268
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 1601744 ~ 1603268 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000313_01602067_01603268.mRNA
ATTGTGAGCAAAAGAGCCCAGTAATTCATTTCCCAGCTGCTGAAGAATTGCAAGAGGTTGGAGATGGGTTTGCTCACCTCGCTGGATCTGCAGCTTTCAAAAATGCTGTAGGAAGCATTGATGGGTGCCAAGTGAGAATCAAGCCACCTAGTACAGATGCTCAGTGCTACCTCAACCGCAAACTATTTCACTCAATTCAGCTCCAAGCAGTTTGTGACCACAGAGGCAAGTTTTTAGACATTTTTGTAGGTTACCCAGGTTCAGTTCACAATTCCAGAGTTCTGAAAAACAGTCCACTATTTTGCCAGCAGCTTTACCCACCTGATAACTTCTGGATCCTTGGGGGTGGCGGGTATCCCTGTATATCTCAGCCAATTGCCCTAATAACTCCATACAGGGAGCCTGTCACAAGTCCAACACAAGCTAGATTCAACCAGCACCATTCAAAGACACGAAGCATCATTGAGAGATCCTTCGGGATAATGAAATCAAGGTGGCGGAGCATCTTTTTTAAAGCTTTGGAGGTGAAGCCCAATTTTGCCCCTGCTGTGATTGCTTGCTGTGCCATTCTTCATAACATTTGTCTCACCAATGGTGACATTTTGGAGCCAGTTGAGGCACCACTTGTGCCAGATGACAACAATGATGCCCTGCCACACAACCAAGACCCTCAGGGTTTTCCCACTTCTTTGCAGCCCTTGCTGGACTGACTTTGTCATTGAGACCCATTTCTTTTAGTACAGCTCTGAAACACAAATAGTTCACAAATTCAGCCCTCAAAGAATGATGAAGGTTCATTTAACATGCATGCAATCATTTAAACACTTAATAAA
>TU511030
TGAAGGTTCATTTAACATGCATGCAATCATTTAAACACTTAATAAATATACACATAATAAAAGTTAATTTGATATTAAAATCTTTGTGAAGCTGTCCTACAGACATAATTGTACGTGTTATGTAGTGATAGGCAAAATCACTGAAAATAATTTCTATTAGCTACAAGGGTTGCAAGCATAGTAAAAAAAATACTCCCTTGCATAATTCATCGTATCAGTTTCATGAAGGCAACATTTGATAGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000313_01602067_01603268.mRNA False 833 mRNA 0.45 2 1601944 1603268
TU511030 True 246 lncRNA 0.30 1 1601744 1601989

Neighbor

gene id symbol gene type direction distance location
CI01000313_01502545_01526050 WDPCP coding downstream 75894 1502545 ~ 1526050 (-)
CI01000313_01249763_01250659 NA coding downstream 351285 1249631 ~ 1250659 (-)
CI01000313_01140265_01183820 PDZD8 coding downstream 417615 1139036 ~ 1184329 (-)
CI01000313_01063333_01083888 MINPP1A coding downstream 518056 1063259 ~ 1083888 (-)
CI01000313_01043093_01055957 PAPSS2A, PAPSS2 coding downstream 545987 1042184 ~ 1055957 (-)
CI01000313_01616695_01623806 PELI1, PELI1B coding upstream 12135 1615403 ~ 1623806 (-)
CI01000313_01653800_01671609 ABCH1 coding upstream 49134 1652402 ~ 1671609 (-)
CI01000313_01677464_01683934 NA coding upstream 73230 1676498 ~ 1683934 (-)
CI01000313_01704439_01705320 DYNLT1 coding upstream 101062 1704330 ~ 1705320 (-)
CI01000313_01757085_01758655 NA coding upstream 153817 1757085 ~ 1758961 (-)
G445134 NA non-coding downstream 41343 1560107 ~ 1560601 (-)
G445148 NA non-coding downstream 44345 1557383 ~ 1557599 (-)
G445126 NA non-coding downstream 118555 1483091 ~ 1483389 (-)
G445027 NA non-coding downstream 128787 1470238 ~ 1473157 (-)
G445019 NA non-coding downstream 290417 1311153 ~ 1311527 (-)
G445183 NA non-coding upstream 670 1603938 ~ 1604264 (-)
G445184 NA non-coding upstream 1880 1605148 ~ 1605450 (-)
G445128 NA non-coding upstream 111687 1714955 ~ 1716525 (-)
G445203 NA non-coding upstream 129792 1733060 ~ 1733750 (-)
G445216 NA non-coding upstream 195776 1799044 ~ 1799273 (-)
CI01000313_00982839_00997272 NA other downstream 612652 982829 ~ 997590 (-)
G444714 NA other downstream 1201848 397607 ~ 400096 (-)
G444653 NA other downstream 1228480 371520 ~ 373464 (-)

Expression


Co-expression Network