CI01000314_01635113_01658762 (AREL1)


Basic Information

Item Value
gene id CI01000314_01635113_01658762
gene name AREL1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000314
NCBI id null
chromosome length 1736912
location 1635113 ~ 1658762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000314_01635113_01658762.mRNA
GAGAAGACATGGGAGAGGTGCTCAGGACCAGATAGGACAGCAGAAGTCGAGGCAGACTCTGAGCTCACAGAGGTGCGCTGGAAGAAAGGCAAGGAAAGTCAGATTGAAGAATGGCTCCAGAGGCACAGCCTATCCGAATACAAGTATTTGTTTGAAGCCTACGTCACCGACCCCTCCGGGGGGGAATTCTTGCAGCGTAATAACTTGGACTTTGAAAGGTGTTGTAAGCACCTTAGGCACATAGCCACACCTAGGCTTCGGCCTGACTACACAGTCAACTCCAGACAAGTGGGGTTAATGGACAGTTGCAGGTCTCCCACACGCTTTCAACATGCTAAAGCAAGCAAGAGCGCTGTCTTCAACGAGAGCACTGGCAGCTGGGAAAGTGCCCTCAGATCTAACGCCAAGTCCCAAACAGATGTTCAGACTCTGGAGGAGCTGAGTTTATGTGTGCTGTCTCGGCTGGAGGAAGTAGTAAAGGAAAAGCATCACTGGAGGGAGATCGCTGAGGCCCACGTGCAGCTGCTCAGAGACTTTGCCTTCCAGGAGTGGCTTTGTTCCCAGAGCCTAGAGCACTACTATCACACATGTCTGCGCTGGCTCGGTCATGTCAGCTGCATGAACACTGGCCGAATGCCCAAAAACTTGCCACTGGCTTCAGGCCATCTGAAGACCCTGGGCTGCACTACCCTGGATGATCTAGCCCAGTTTGACAGCCAGCTTCAGCTCTCTCTGGCAGCGTGGGGCTATTACTACGAGGATTACATCAAACTGTCCACAGGCGTGAGGGTCCTCCAGGCATCTAAGGGAAGCAGAGATCAAGACTACGAGATTCAGCTGGTGCACAGCCTTGCTGAGAGGCGGCTGAATGAGAAGTGGTCTTTTGGTGGAATAACTGTTTCCATCATCGCATTCGTCTTTACCATCAAGTTTCTGTGTGAGCTTGCTGCTCGTGTGGTCAGCTTCTTACAGAATGATGACCCTACCCGTCATGGGGACCGCAGTATTTACGACTATGTGCGGGGTAATTATTTGGACCCACGCTCATGCAAGGTCTCCTGGGACTGGAAAGAGCCACAAGAAGTGGGTCAAACCATGAGTTTCCGAGTGCAGCTCTTTTACAAAAATGGCCAGCCATTTCCTGCACATAGACCTGTGGGACTGAGGGTGAACATCACTCACATAGAGCTGGCTTTAGAAGTCCCTGTGACCCAGGAAGTCCTTCAAGAGCCTGAATCTAATGTAGTCAAAGTGGCCTTCACTGTGCGCAAGGCTGGACGCTACGAGGTAGCTGTAAAACTTGGAGGCCTAAATGTGGCCTACAGTCCTTACTACAAGATATTCCAACCAGGTACAGTGGTCCCATCCAAAACAAAGATAGCATATCACTTCTCAACACTGGTGCTGACTTACGGCCAGCAGCACACGCTGCAGATAGAACCAAGGGATGAGTATGGCAACCCCACCAGTAACTCTGTCTCACTGGTGGATGAGGTCAATTACAGCGTGCATGTCCACCCATTGGGCACAGTGGAGGAGGAAAGCTCAGAAGATTGCTACATCACATCAGTATCATTAAACAAGCCTCAGTGTCAGGTTCTGATGAGGCTCACTTTTAAGAAGAAAGGCTGTTTTAGAGCATGCATCTCATACAGGGACCAGCCCCTCAGCAATGGGGAGTTTGACATCATTGTACTCAGTGAAAATGAGAAGAACTGTGTGGAGAAAAACGTGTCTACTCCAGGCATAAGTATCTACTTTGAGGCCTACCTCTATAACATGGGCACTTACAGTAGCTGTCCATGGCAGTTTCTAGCATCGTCCCAGCTAGCCCTGCAGAGACGGCCCTCCATGGGCGATGAGGAGGAGGAACATGACTCCCCTGTAGAGGGCCAGTCAGAGAAGGTCAAGAAACCAAAAAAGGTCTATTGCTATATCTCACCAAAGTTCACATACCATGGACCAGACCCTGTTCATAAATACCTAACACTGGTGGTAGATGATGGGATTCAACCTCCAGTAGAGCTCAGCTGTAAGGACAGAAATATCATGGCTGCCACCTTTATCCGATTTCTCCACAAGAACATTGGAGGATCAGAGACTTTTCAGGATAAAGTGAACTTTTTTCAGCGGGAGCTGAGACACATTCACTCAAAAAAACCTCGCACCAAAACCTGCCTGAAAATCAGTCGTCCTTCTCTGCTTGAGTCGTCTCTGAAGGCCACACGGAACTTTTCTGTGTCTGATTGGAGTAAGAACTTTGAAGTTGTGTTCCAGGATGAGGAAGCTCTGGACTGGGGAGGGCCAAGGCGTGAGTGGTTTGAGCTTATCTGTAAGGCTCTGTTTGATACCAATAACCAGCTTTTCACACGCTTCAGTGACAACAACCAAGGCTTGGTCCACCCAAACGCAGATCGCCCCCCTCACCTGAGGGTGAAGATGTATGAGTTTGCAGGGCGAGTGGTCGGGAAATGTCTATATGAATCAGCTTTAGGCGGGGCCTACAAGCAGCTAGTACGAGCCCGATTCACCCGCTCCTTCTTGGCTCAGATTATTGGATTACGTATGAACTACAAGTACTTTGAAACTGACGATGAGGAATTTTACAAAACTAAGGTCTGCTTCATTCTGAACAATGATGTCAGTGAAATGGACCTGGTGTTTGCAGAGGAAAAATATAGCAAGTCAGGACACCTGGAAAAGGTAGTGGAATTGATATCTGGTGGTGCTCAAATTGCCGTGACCAATGAGAATAAAATTCACTACTTAAACCTGTTGGCCCAGTACAGACTAGCCAGTCAGGTGCGAGATGAAGTAGAGCATTTCCTCAAAGGTTTGAATGAACTGGTCCCTGAAAACCTTCTAGCCATATTTGATGAGAATGAATTGGAGTTGTTGATGTGTGGTACAGGAGATATTAACGTACAGGACTTTAAAGCTCATGCTGTTATTGTTGGAGGGTCATGGCACTTCAGAGAAAAG

Function

symbol description
arel1 Orthologous to human AREL1 (apoptosis resistant E3 ubiquitin protein ligase 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000314_01635113_01658762.mRNA True 2982 mRNA 0.49 20 1635113 1658762

Neighbor

gene id symbol gene type direction distance location
CI01000314_01398459_01474471 TIAM2A coding upstream 160642 1398459 ~ 1474471 (+)
CI01000314_01334065_01347608 SCAF8 coding upstream 286803 1334065 ~ 1348310 (+)
CI01000314_01238763_01250499 NA coding upstream 384032 1238621 ~ 1251081 (+)
CI01000314_01096672_01145574 CNKSR3 coding upstream 489517 1096672 ~ 1145596 (+)
CI01000314_01059252_01065169 QPCT coding upstream 569306 1059252 ~ 1065807 (+)
CI01000314_01695225_01696495 NA coding downstream 36463 1695225 ~ 1696499 (+)
CI01000314_01700805_01709471 NA coding downstream 42043 1700805 ~ 1709537 (+)
CI01000314_01716386_01722096 NA coding downstream 57337 1716099 ~ 1722096 (+)
G446209 NA non-coding upstream 11509 1616923 ~ 1623604 (+)
G446227 NA non-coding upstream 71131 1563590 ~ 1563982 (+)
G446203 NA non-coding upstream 336330 1298498 ~ 1298783 (+)
G446171 NA non-coding upstream 345055 1215825 ~ 1290058 (+)
G446170 NA non-coding upstream 351905 1206793 ~ 1283208 (+)
G446256 NA non-coding downstream 25171 1683933 ~ 1684143 (+)
G446259 NA non-coding downstream 33444 1692206 ~ 1692661 (+)
G446181 NA non-coding downstream 63458 1722220 ~ 1724903 (+)
G445422 NA other upstream 1322092 311532 ~ 313021 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location