CI01000325_07604006_07618057


Basic Information

Item Value
gene id CI01000325_07604006_07618057
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 7604006 ~ 7618111 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_07604006_07618057.mRNA
ATGTCTGCGACAGAGGAGGACACGGAACTCAGAGATCTACTGATCCAAAACTTGGAAAACAGCGGTGTTTTGAATAAAATCAAGGCAGAGCTTCGTGCAGCTGTTTTTCTTGCCTTGGAGGAGCAGGACAAAGTTGAGAATAAAACTCCTCTTGTGAATGAAAACCTGAAAAAGTCCCTCAACACGAAGGATGGGCGCTTGGTAGCAGGTCTTATCACTGACTTCCTGCAAGTCTTCAATTTAGACTTCACTCTGGCTGTGTTTCAACCTGAAATTAGCACGCTGAATGGGCTCGACAGTCGTGAAACTCTGTCTAAAGAGCTTGGCATCTCTGAATTGGAGGTGAATAAAAACACCCCTCTCCTGCTAGAGTTAGTGAAGAGGGGCCGGCATAAGGACAAGACCTCCATTTTCACCGAGGGAGATCGGGTGACCGAGAGAACTTTTCCCAAGGAATTGTTGCCTCGTCAAATTGCTGATGCCCGCAAGAAATTTGACAGTCATGACAAGAACAGAAGTGGTGAGATCAACAGAGATGCAGTTATTGGCATTTTCGTGGATCTTTTCCCCCAGTTCAGCAGGTTTGTTTCATCATTGTGGATTCTGAATGCCACAAACTCTAGGAATATTCTTAACTTACTGGTTACCAGTGACAATAGCGACGCACTTTACTCCTCATGTAAAACTGCTGAAGACAGAATCATTTCAACTTCAGTCAGTAAGATACCCAGGTATAAAGGATTTGTTAAACACAGTTCAGCGCAGGAAGAAAAGGCTGACCCGAAGGCTGCAGATAGAAGACCTGGTGAAACACTAGGGTCTCAGAAGAACAGAGGGTCTGTTCAAGTGTCTGAAGGCTCAGAGGAGGTATTAGGTGATGGGAAAAACCTTCCCACCCCACTGAGGAGAGCGCTGGAATTCGGACTGGAGGATGAGGATGAGGAAGGAGACTCATTCTTCGATGATCCTCTTCCTAAACCTCAGAAGACTTATGGCTGCCTGTCTGCTATAGGCAGTGATAAAGAGGGAGATGGAGAGGACATGCTCTCTGACTGTGATAACAGGCCCAGCCCTGACTCTGAACCCAGGAGAGAAGGCTTGGGCAGCAGTTTAGGAAAAGCATTCGCCATAGACGCGCAGCTAAAGAGCACGGGAGGATCCATCTCTGCTGAGAGCAGCCAAAAAGATCATTCATCTGACAAGAATGGTACGTCTAGTTCTAAAGATAAGGGTGTCAAAGATTTTCCCACACCAACTGAAAAAACCGGATCCCCTTTGCTAGATGAAGATGCTGACTATGACGATGATTTCAACAGTCATCGTTCTGAAAACTCTAAGAGTGAAGTGAGCATAGATGAGGAGATTGAGGAGGTTTCAATGGAGGGGCCTGACATCAGTGATAAGCTTGATGAAACCACTCAGGATGTGAGCGTCTCACAGATCAGTTTGGGTGCAGACTACATGGAAGATGTTGCTTGATACCCGTCAGTTCCTTGTTTTGTACTTTATGTATTTATGGATTTAGTTGACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_07604006_07618057.mRNA True 1533 mRNA 0.46 17 7604006 7618111

Neighbor

gene id symbol gene type direction distance location
CI01000325_07573712_07597027 MYT1LA coding upstream 6979 7573712 ~ 7597027 (+)
CI01000325_07556421_07561822 NA coding upstream 42109 7556180 ~ 7561897 (+)
CI01000325_07487518_07491720 RNASEH1 coding upstream 111733 7487518 ~ 7492273 (+)
CI01000325_07350073_07369476 NA coding upstream 234230 7349238 ~ 7369776 (+)
CI01000325_07140324_07162617 KIDINS220B, KIDINS220 coding upstream 440343 7140324 ~ 7163663 (+)
CI01000325_07620275_07621402 CCR6A coding downstream 2164 7620275 ~ 7621873 (+)
CI01000325_07626395_07634972 ACBD3 coding downstream 8098 7626209 ~ 7635360 (+)
CI01000325_07689808_07742619 NHSL1B coding downstream 71697 7689808 ~ 7742619 (+)
CI01000325_07775362_07777824 SOD2.L, MGC80739, SOD2 coding downstream 157251 7775362 ~ 7778055 (+)
CI01000325_07870639_07909517 OTOFA, OTOF coding downstream 252528 7870639 ~ 7909826 (+)
G466452 NA non-coding upstream 104210 7499336 ~ 7499796 (+)
G466451 NA non-coding upstream 104767 7498618 ~ 7499239 (+)
G466330 NA non-coding upstream 411699 7191755 ~ 7192307 (+)
G466234 NA non-coding upstream 502079 7101582 ~ 7101927 (+)
G466308 NA non-coding upstream 572595 7031181 ~ 7031411 (+)
G466479 NA non-coding downstream 136083 7754194 ~ 7754549 (+)
G466490 NA non-coding downstream 170229 7788340 ~ 7788622 (+)
G466515 NA non-coding downstream 214236 7832347 ~ 7834377 (+)
G466517 NA non-coding downstream 217650 7835761 ~ 7840350 (+)
G466496 NA non-coding downstream 315547 7933658 ~ 7935181 (+)
G466219 NA other upstream 117599 7482036 ~ 7486407 (+)
G466227 NA other upstream 289194 7312083 ~ 7314812 (+)
G466236 NA other upstream 599351 7003617 ~ 7004655 (+)
G466137 NA other upstream 984535 6617200 ~ 6619471 (+)
G466144 NA other upstream 1102028 6498766 ~ 6501978 (+)
G466752 NA other downstream 956005 8574116 ~ 8575210 (+)
CI01000325_08732866_08734588 NA other downstream 1114403 8732514 ~ 8734758 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location