CI01000325_07911751_07918447 (PDIA6)


Basic Information

Item Value
gene id CI01000325_07911751_07918447
gene name PDIA6
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 7911751 ~ 7918447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_07911751_07918447.mRNA
CCACCGTACCTCACCGAGGCACAGAACTACACGTCGAGCTCCTATTGGCTAAGGTCGTCTCCGGGTGGAGGCGCGCCAATCAGCGCGGGCCACGGTGTGTTAGCGTGTTCCCTGACTGTACTCTCTGTCCACGGTCTCTACTCTGCCAGTGATGATGTGGTTGAACTCAACCCCTCCAACTTTAACAGGGAAGTCATGCAGAGTGACAGTCTCTGGCTGGTCGAGTTTTATGCCCCCTGGTGTGGTCACTGCAAGAGCTTGGCTCCTGAATGGAAGAAAGCAGCCACAGCTTTAAAGGGCATTGTGAAGGTGGGTGCTGTGGATGCAGACCAACACAACTCCCTGGGAGGCCAGTATGGAGTCCGAGGCTTCCCAACTATCAAGATCTTTGGAGCCAACAAACAAAAACCAGAGGATTACCAAGGTGGCCGTACCAGTCAGGCCATTGTAGACGCAGCTCTGAATTCTCTCCGCTCCCTGGTCAAAGACAGACTTGGTGGAAAGACTGGAGGTTCAGACTACAGCAGACAGAGTGGAGGTGGTGCTGGCAATAAGAAGGATGTGGTGGAGCTGACCGATGATAACTTTGACCGTACCGTGCTGGACAGCGACGATGTCTGGTTGGTGGAGTTCTTCGCCCCCTGGTGTGGACACTGCAAAAATCTTGAGCCAGAATGGACGGCAGCCGCCACAGAAGTCAAAGAGCAGACGAAGGGTAAAGTGAAACTGGGTGCTGTGGATGCTACTGTTCAACAGGGCTTGGCAAGCCGCTATGGGATTCGAGGATTCCCCACCATCAAGATCTTTCGTAAAGGAGAGGAGCCAGAGGACTATCAGGGGGGACGTACCCGATCTGACATTGTTGCTCGTGCCTTGGACCTCTTCTCTGATAACATCCCTCCTCCAGAGCTTCAAGAGATTTTGAGTGAAGATGTTTTGAAGAAGACCTGCGAGGACTATCAGCTGTGTATCATAGCTGTGTTGCCTCACATTCTAGACACAGGTGCATCTGGAAGAAACTCTTACCTGGAAGTGATGAAGATGATGGCAGAGAAATACAAGAAGAAGATGTGGGGTTGGTTGTGGACTGAAGCAGGGGCACAGATGGAGCTTGAGGCCTCTCTTGGAATTGGTGGATTTGGCTATCCCGCCATGGCAGCCATTAATGCTCGCAAGATGAAGTTCGCTCTGCTTAAAGGCTCATTCAGTGAAACAGGCATCCACGAATTCCTCAG

Function

symbol description
pdia6 Predicted to enable protein disulfide isomerase activity. Predicted to be located in endoplasmic reticulum lumen. Is expressed in several structures, including axis; hatching gland; nervous system; pectoral fin musculature; and polster. Orthologous to human PDIA6 (protein disulfide isomerase family A member 6).

GO:

id name namespace
GO:0006457 protein folding biological_process

KEGG:

id description
K09584 PDIA6, TXNDC7; protein disulfide-isomerase A6

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_07911751_07918447.mRNA True 1235 mRNA 0.52 11 7911751 7918447

Neighbor

gene id symbol gene type direction distance location
CI01000325_07870639_07909517 OTOFA, OTOF coding upstream 1925 7870639 ~ 7909826 (+)
CI01000325_07775362_07777824 SOD2.L, MGC80739, SOD2 coding upstream 133696 7775362 ~ 7778055 (+)
CI01000325_07689808_07742619 NHSL1B coding upstream 169132 7689808 ~ 7742619 (+)
CI01000325_07626395_07634972 ACBD3 coding upstream 276391 7626209 ~ 7635360 (+)
CI01000325_07620275_07621402 CCR6A coding upstream 289878 7620275 ~ 7621873 (+)
CI01000325_07939376_07954501 NA coding downstream 20843 7939290 ~ 7954531 (+)
CI01000325_07957635_07968589 SLC22A16 coding downstream 39188 7957635 ~ 7969871 (+)
CI01000325_08504398_08512325 NA coding downstream 584981 8503428 ~ 8513052 (+)
CI01000325_08524608_08524883 NA coding downstream 605627 8523963 ~ 8532490 (+)
CI01000325_08564758_08568932 SESN1 coding downstream 646311 8564758 ~ 8568999 (+)
G466517 NA non-coding upstream 71401 7835761 ~ 7840350 (+)
G466515 NA non-coding upstream 77374 7832347 ~ 7834377 (+)
G466490 NA non-coding upstream 123129 7788340 ~ 7788622 (+)
G466479 NA non-coding upstream 157202 7754194 ~ 7754549 (+)
G466452 NA non-coding upstream 411955 7499336 ~ 7499796 (+)
G466496 NA non-coding downstream 15211 7933658 ~ 7935181 (+)
G466539 NA non-coding downstream 61666 7980113 ~ 7981948 (+)
G466536 NA non-coding downstream 130270 8048717 ~ 8049661 (+)
G466600 NA non-coding downstream 179332 8097779 ~ 8098100 (+)
G466601 NA non-coding downstream 180381 8098828 ~ 8099139 (+)
G466219 NA other upstream 425344 7482036 ~ 7486407 (+)
G466227 NA other upstream 596939 7312083 ~ 7314812 (+)
G466236 NA other upstream 907096 7003617 ~ 7004655 (+)
G466137 NA other upstream 1292280 6617200 ~ 6619471 (+)
G466144 NA other upstream 1409773 6498766 ~ 6501978 (+)
G466752 NA other downstream 655669 8574116 ~ 8575210 (+)
CI01000325_08732866_08734588 NA other downstream 814067 8732514 ~ 8734758 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location