CI01000325_09288339_09296072


Basic Information

Item Value
gene id CI01000325_09288339_09296072
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 9288032 ~ 9296126 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_09288339_09296072.mRNA
ACAAAAATTCAAAAATGACCGATCTCCCTCCTGAAATGTTATAGTCCCTAAGCAATGCAGCTTGTTGATTCAAGCATTTTTTATTCTACGAAGAGATATTCAGTCCTGAGTGAATGGACATCAGTGTCACAACTGTCTCGCTGTGACTGGGTGAACTTGGAAGACAGTGAAAAGGTGAGGCAGCCGTCTGATGATTACTGGGGTGAGTATGGCCCGTACGGAGCCTGCAGCCGCACATGTGGCTCCGGAGTAGCTGTGAGAACCAGAGTCTGCAACACTATGAGGTTGGAATGCCCTGTAGGAGCTCTAGATTTTCGCGAAGAACAGTGTTCTCATTTTGACCGAATGGAGTTCCAGGGAAAACGTTACACCTGGCAGCCGTATTATGGAGCGTCAAACCCATGTGAGCTGGTGTGTGTGCCCAGAGGAGAGAACTTCTACTACCGTCACAGACCCACTGTGGCGGACGGCACACCATGCTACGTGGGTCGCAGAGACATCTGTGTGGAGGGTGTCTGCAGAGCGGTGAGCCATGGGGAGATTGTGGCATTTGAGGATCACTCTCTTCCTGTCACTTCTGGACATGGACCTGCTGCTGCTCATCTGGACACCTACAGGTACACATACAGCACCTATTCAGAGTGTACTCTTCACTGTGGTGGGGGCGTGCAGACCCGTACTGTGTACTGTATTAATGAGAGAACGTCAGCAACGGTAGATGAATCTCACTGCATTGCACAAGGCCTCAGGAAACCAACTTCCCAGGAGGCCTGCAATCAGCACCCTTGTGTCGAGTACAGTGTTGGTCCATTTGGTGATTGTTCAGTGACGTGTGGCGAAGGACAGCAGACGCGGGAGGTGTTGTGCATCGGTGGCAGAGGAGAGCGTCTCCCTGAGCACCACTGCAGGGGTCTCACACGTCCACATGAGATCAGATCCTGTCAGAGACCAGCTTGCCACAAAGTTTTTAGATACTACACCAATGACTTCAGCTTGTGCACTCGTAGCTGTGGAACTGGTACTCGTGAGCGCAAAGTGGTATGCATGGATTTGGATCTCCATCAATATGCAGATGATAGATGTGCTTCTCTCAGCAGACCTCATGCTGTGGAGAACTGTAACACACAGCCCTGCCCTGGTGCACAAATGGTGCCCAGCGTTCAGGACCCTAGTGATTACGAGAGCTCCTTGCGTGGATTTGTGCCTCATACCCATGATGCAGCCTCAGTTCACAGACCAAGCGATCCATACCCCACAGTGACCGGTCCGCATTGTGCCCAATCATATTACGGCTGCTGTCCTGATGGCCACACTACTGCCTCTGGACCTCGTGGAGAAGGCTGTGCTCACGATGACTGTCATAGGTCCAGATATGGCTGCTGCCTGGATGGAGTAACTTCTGCTCATGGTTTTGGAAGAGCAGGATGTCCTGATTCCCCCTATAGGGACTATAGCCCAGTCCGTCAACCCTCTGCTAGTGTGTGCTCTTTGGCACAGGAAGTTGGGTCCTGTTATGAATGGACAGCTCGTTTCTACTTTGATCATTCCTCTGGCTCTTGCTTGCATTTCTGGTACGGTGGTTGCCAAGGAAATGGCAATAACTTTGTCTCCAAAGAGGAATGTGAGCGGACATGTAAGGCTTCTGCCAGAGGCCTTGCCCCAAGAGAACCAACATCCAGGAGAGGGATCAACGGGGTCAGAGGTTATAGAATGAGATCCCGTGCATAAAGGGGTCAAAAGAAAGGTCATTGCAATCCCACAACAAACAAATCCCACTCACATACATGTACAAAACAACAATTTATTCAAAGGTGCACACAGTAATTTTGCGCTAGCTGATATGAAATATATCTTGTGTTTATACTGACATCTATTGGCATTCATTTGTGAAAAAAATATTGAGTGCAATCAAGCTTTTTATTGTACGTTCAGATAAACAGATTCACTTTACAGTATTTGTCAAACATGACAGCATCAAACAAGTAATTTACACATCCAGTCTCAATAACAGTTTCATTAATTTCATGAAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_09288339_09296072.mRNA True 2035 mRNA 0.48 13 9288032 9296126

Neighbor

gene id symbol gene type direction distance location
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S coding downstream 1476 9285532 ~ 9286556 (-)
CI01000325_09266964_09281814 SMEK1, PPP4R3A coding downstream 5970 9266624 ~ 9282062 (-)
CI01000325_08919961_09083730 NBAS coding downstream 204302 8919961 ~ 9083730 (-)
CI01000325_08701427_08704727 NR2E1 coding downstream 583305 8701300 ~ 8704727 (-)
CI01000325_08645444_08676032 NA coding downstream 612000 8644731 ~ 8676032 (-)
CI01000325_09334619_09368476 ROCK2B coding upstream 38478 9334604 ~ 9368476 (-)
CI01000325_09400787_09422170 FAM102B, FAM102BB coding upstream 104661 9400787 ~ 9422170 (-)
CI01000325_09434932_09471529 NA coding upstream 138779 9434905 ~ 9471529 (-)
CI01000325_09518831_09533382 NA coding upstream 222637 9518763 ~ 9533787 (-)
CI01000325_09537381_09540937 NA coding upstream 241090 9537216 ~ 9541330 (-)
G468481 NA non-coding downstream 83185 9204570 ~ 9204847 (-)
G468467 NA non-coding downstream 110290 9177533 ~ 9177742 (-)
G468462 NA non-coding downstream 128468 9158746 ~ 9159564 (-)
G467978 NA non-coding downstream 201079 9086569 ~ 9086953 (-)
G467970 NA non-coding downstream 275777 9011924 ~ 9012255 (-)
G468460 NA non-coding upstream 34904 9331030 ~ 9333199 (-)
G468550 NA non-coding upstream 77865 9373991 ~ 9374349 (-)
G468551 NA non-coding upstream 79017 9375143 ~ 9375365 (-)
G468562 NA non-coding upstream 90328 9386454 ~ 9395538 (-)
G468545 NA non-coding upstream 283864 9579990 ~ 9581436 (-)
G467741 NA other downstream 590449 8679172 ~ 8697583 (-)
CI01000325_08571807_08594165 NA other downstream 716554 8568722 ~ 8594736 (-)
G467578 NA other downstream 1332840 7946345 ~ 7955192 (-)
G467570 NA other downstream 1671202 7615486 ~ 7616830 (-)
G468702 NA other upstream 870973 10023665 ~ 10193979 (-)
G468823 NA other upstream 1020004 10316130 ~ 10316685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location