Gene
RNA
| Item | Value |
|---|---|
| gene id | G467696 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000325 |
| NCBI id | null |
| chromosome length | 10587162 |
| location | 7865070 ~ 7882549 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU536804 | False | 405 | lncRNA | 0.47 | 3 | 7865070 | 7873175 |
| TU536805 | True | 331 | lncRNA | 0.49 | 3 | 7872926 | 7882549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000325_07842685_07843506 | NA | coding | downstream | 21089 | 7842614 ~ 7843981 (-) |
| CI01000325_07804434_07838590 | FNDC1 | coding | downstream | 26480 | 7803813 ~ 7838590 (-) |
| CI01000325_07767596_07772629 | WTAP | coding | downstream | 92441 | 7767074 ~ 7772629 (-) |
| CI01000325_07762711_07766606 | ACAT2 | coding | downstream | 98420 | 7762017 ~ 7766650 (-) |
| CI01000325_07751796_07760355 | KIF25 | coding | downstream | 104715 | 7751371 ~ 7760355 (-) |
| CI01000325_07921827_07924727 | HPCL1, HPCAL1.L, NCALD, HPCA.S, HPCAL1, HPCA | coding | upstream | 39273 | 7921822 ~ 7924803 (-) |
| CI01000325_07981141_08041611 | UST | coding | upstream | 98592 | 7981141 ~ 8041611 (-) |
| CI01000325_08045625_08085553 | SASH1A, SASH1 | coding | upstream | 163044 | 8045593 ~ 8085553 (-) |
| CI01000325_08274921_08276062 | SAMD5 | coding | upstream | 391826 | 8274375 ~ 8276110 (-) |
| CI01000325_08294503_08351697 | STXBP5A, STXBP5 | coding | upstream | 411810 | 8294359 ~ 8352537 (-) |
| G467677 | NA | non-coding | downstream | 83580 | 7781174 ~ 7781490 (-) |
| G467676 | NA | non-coding | downstream | 85562 | 7779245 ~ 7779508 (-) |
| G467675 | NA | non-coding | downstream | 86278 | 7778323 ~ 7778792 (-) |
| G467582 | NA | non-coding | downstream | 86997 | 7774484 ~ 7778073 (-) |
| G467590 | NA | non-coding | downstream | 114170 | 7750375 ~ 7750900 (-) |
| G467703 | NA | non-coding | upstream | 11248 | 7893797 ~ 7896980 (-) |
| G467594 | NA | non-coding | upstream | 48620 | 7931169 ~ 7933312 (-) |
| G467730 | NA | non-coding | upstream | 503917 | 8386466 ~ 8387233 (-) |
| G467736 | NA | non-coding | upstream | 515975 | 8398524 ~ 8398751 (-) |
| G467784 | NA | non-coding | upstream | 641443 | 8523992 ~ 8524875 (-) |
| G467570 | NA | other | downstream | 248240 | 7615486 ~ 7616830 (-) |
| G465716 | NA | other | downstream | 2236902 | 5626213 ~ 5628168 (-) |
| CI01000325_05531464_05543064 | ITPK1A | other | downstream | 2332228 | 5528844 ~ 5543064 (-) |
| CI01000325_05430077_05434997 | NA | other | downstream | 2430017 | 5430010 ~ 5435253 (-) |
| CI01000325_04815250_04816016 | CHURC1 | other | downstream | 3048992 | 4815234 ~ 4816188 (-) |
| G467578 | NA | other | upstream | 63796 | 7946345 ~ 7955192 (-) |
| CI01000325_08571807_08594165 | NA | other | upstream | 682081 | 8568722 ~ 8594736 (-) |
| G467741 | NA | other | upstream | 796623 | 8679172 ~ 8697583 (-) |
| CI01000325_09286047_09286556 | ERH.L, ERH, ERH.S | other | upstream | 1402983 | 9285532 ~ 9286556 (-) |
| G468702 | NA | other | upstream | 2284550 | 10023665 ~ 10193979 (-) |
