G467784


Basic Information

Item Value
gene id G467784
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 8523992 ~ 8524875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU536906
TCTGGAGCAAACATATGCATTTCTCCCTGACGTCTTCATAAGGACACCTTTTGGAGAGCATCAGGACATGGGCAAGAAGAGAGTTGAGATCACTGGACAGACTGTCATCCATGGCAGAAGGGGAGGAGGACTGTGGGTCCAGTATTGACCCGATGTTCTCTATTCTCTTCATCACCTCCTGGTGAATGAGCTCCATCGCTGCTTGTCTGGAGCTTGAGTCTCTACTGCCCAGAGCATCCCACCTTCCCGCAGAGTCTCTCACATCCATCACTGTAACAGTCTACTTACTATTCTTCAGTTATATACACCTGACAGACAGAGCTAAATTCACATTCTCTCTAGTCGTCCCTGCTGCCGTTGAATGAAACCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU536906 True 372 lncRNA 0.48 2 8523992 8524875

Neighbor

gene id symbol gene type direction distance location
CI01000325_08517828_08523052 NA coding downstream 536 8517614 ~ 8523456 (-)
CI01000325_08488183_08498054 NA coding downstream 24629 8488017 ~ 8499363 (-)
CI01000325_08468869_08484123 GRM1, GRM1A coding downstream 39507 8468741 ~ 8484485 (-)
CI01000325_08451080_08466811 RAB32, RAB32A coding downstream 56452 8449373 ~ 8467540 (-)
CI01000325_08399592_08444962 ADGB coding downstream 79030 8399562 ~ 8444962 (-)
CI01000325_08571807_08594165 NA coding upstream 46578 8568722 ~ 8594736 (-)
CI01000325_08609784_08639480 FOXO3, FOXO3B coding upstream 84749 8609624 ~ 8642039 (-)
CI01000325_08645444_08676032 NA coding upstream 119856 8644731 ~ 8676032 (-)
CI01000325_08701427_08704727 NR2E1 coding upstream 176425 8701300 ~ 8704727 (-)
CI01000325_08919961_09083730 NBAS coding upstream 395086 8919961 ~ 9083730 (-)
G467736 NA non-coding downstream 125241 8398524 ~ 8398751 (-)
G467730 NA non-coding downstream 136759 8386466 ~ 8387233 (-)
G467594 NA non-coding downstream 590680 7931169 ~ 7933312 (-)
G467703 NA non-coding downstream 627012 7893797 ~ 7896980 (-)
G467696 NA non-coding downstream 641443 7865070 ~ 7882549 (-)
G467792 NA non-coding upstream 8399 8533274 ~ 8534040 (-)
G467793 NA non-coding upstream 9234 8534109 ~ 8534326 (-)
G467796 NA non-coding upstream 16621 8541496 ~ 8541770 (-)
G467797 NA non-coding upstream 17003 8541878 ~ 8542267 (-)
G467798 NA non-coding upstream 17505 8542380 ~ 8542611 (-)
G467578 NA other downstream 568800 7946345 ~ 7955192 (-)
G467570 NA other downstream 907162 7615486 ~ 7616830 (-)
G465716 NA other downstream 2895824 5626213 ~ 5628168 (-)
CI01000325_05531464_05543064 ITPK1A other downstream 2991150 5528844 ~ 5543064 (-)
CI01000325_05430077_05434997 NA other downstream 3088939 5430010 ~ 5435253 (-)
G467741 NA other upstream 154297 8679172 ~ 8697583 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other upstream 760657 9285532 ~ 9286556 (-)
G468702 NA other upstream 1642224 10023665 ~ 10193979 (-)
G468823 NA other upstream 1791255 10316130 ~ 10316685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding NC_056718.1 CM032087.1 16859343 ~ 16860256 (-)