CI01000325_08517828_08523052


Basic Information

Item Value
gene id CI01000325_08517828_08523052
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 8517614 ~ 8523456 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_08517828_08523052.mRNA
AGAAAACAAGTAGATTTTTTGTCAGCCTAATACAGAAATAATTGTAAGATAAGTGTCAATTTGTAAATTTATTTTTTTGAAATGTAATAACATAAGCCCTGAAGTTGTGTCTGAGCCTGTAAAATTCTAGCATTGTCAAATCTATCTATCTGTCTGTCTGCCTATCTATCTATCTATCTATCTATCGTTTTCTTTTTTAACAACAGTATTTGTCTTGAATGTAGAAGCTGTGGTCATTGTGTGCATGCGGAACCACTGAGGGCGGTAAAAGAAGAGGGAAATTTGAAACTGGGCGGCGCTGTCGGCTACAGCTGTTAACATGGTGATACTAACAGCTAATTCATATGTACCTAGATGAATACATCATTTTTTCTTATGTGAATAAACGAAGAAACTGATTCATAATGGATCACTTAGGAGATCAGAGTTTAAACCTGGACTCCCCATCTAAACAGAGTTATGTTGGCAGTTATTACCAGCCTCCAGAGACGTTGTCAAGGCCCCTGTACATGAACACAGTCACAGATCCACTGGACAGAAAGAGCTCAGGTGTACAGGACATCAGCCCACAGATTTATCAAAGAGTACCTGATGCTGGAAGTAGAGAAGCAGTGATAGCAGCCCTGAAAACACTGCAGGAGAAGATGCGACGCTTGGAGCTGGAGAGAGTTCAGGCAGAGAGGAACATCCAACAATTTTCTCATGCTGCTCGACACCAGGCAGATGCAATTGCAAAGAGAGAACCAGAGAACAGCACACGAGATAATCACTCCACACAGAGGAAAGAGCTGGTTTCAAAAGTTCATTCTGCAGAAACACGTTGCTCTCTGCTGGAAAAACAGCTTGACTATATGAGGAAAATGGTGGAGTGTGCAGAGAGAGACAGAATCGCTCACACAGACAGACAGGACTCTCTTTGCAAGGAGAGCAAACATACAGACCCACAAATGCAGGCGCAGCTCAATAAATTGGAAAGACTGGAAAAGGAGTATCTCAAACTCACTAGTACACAGTCTATGGCTGAGAGGAAGATTGAGCTCTTAGAACAGAAACTTTTAGAGGAGGAACATGAACGCAAACTTGTGCAGGAGAAAGCAGAGAAGTTGGAGCGAGAGCTTGAAAACAATCTCCTCTCTCTTTCTGTTGCGACTCAACCTAAAGGCAAGAAAAAGAAAGGCAAGGCCTCTTGCAAGAAGTCCCCTTCAGTGAAGGTGGAAACTGCCCAAACTCCTAAAGCTAAACGCCTCCCATTCGTGGCTGGAACATCGACCAGTCCCAGCCACTCAGTCAATGCCAATGTTCAGAGTGTGTTGCATATGATGAAGCACAGAAACCCACGGTTGTGTGAGAGAGTGAGCGCTCTGCAGAAGTCATGTCCTCAGAACCAGCGGGTCCATCGCAGGCCTTCGTCCTCCCCCAGCAAGGCAGCTTCCGCAATGGGTAGCCTTTCTGAACTTCTCCTCGCCCTCCAGGATGAACTGGGCCAGATGAGCTTTGAACATCAGGAGCTGGTCAAGCAGATAGACGAGACTACTAAACGAGAGCTTCGTGACGATCTGGAGCGAGAGCTGGACTGTCTGGTCAAGAGAATGGAGGAGAAAGCAGCTCAAATCTCCAAACTACGCAAACATCAGCAAACAGTTCAGAAACTCTCCCAGCCATCCTGTAGCCCCAAGCAAAAGCCACATTGGGCCGCCAGTGTAGAGGGCAAAACCAGGGCACAGAGTGGGGTACAACCATTGCCACCGTCCCCTGTCAAAGGCTCACCCAGCACGGGACAGAAACAGAGCAGGAGCAGTCATGAGACCCTGAAGCTCCTCAGAGAGACACAGAAACTGTGCTCTAGCCTCCGCAGACAGGACATCACATGGGAGACATAGTTACATTATTCTGAAACACACATCTAGGGCTTAGAAGAGTCACTGCAGTTCAAGAGGACACTGGAACAACGCCCTCAGGAAGATCACAAAACACTGATTAATCTGCATCTAAATCCAGGAAGCCTTCATAACTTTAAATGACTTCAATGAGCTTAATTGATTTTTTTATTTCTGTTGTTCATATTTTTTATTTGAATAACAAGTTGTAAATAAA

Function

NR:

description
Zgc:101037

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_08517828_08523052.mRNA True 2094 mRNA 0.45 11 8517614 8523456

Neighbor

gene id symbol gene type direction distance location
CI01000325_08488183_08498054 NA coding downstream 18251 8488017 ~ 8499363 (-)
CI01000325_08468869_08484123 GRM1, GRM1A coding downstream 33129 8468741 ~ 8484485 (-)
CI01000325_08451080_08466811 RAB32, RAB32A coding downstream 50074 8449373 ~ 8467540 (-)
CI01000325_08399592_08444962 ADGB coding downstream 72652 8399562 ~ 8444962 (-)
CI01000325_08366684_08385221 STXBP5 coding downstream 132298 8366374 ~ 8385316 (-)
CI01000325_08571807_08594165 NA coding upstream 47997 8568722 ~ 8594736 (-)
CI01000325_08609784_08639480 FOXO3, FOXO3B coding upstream 86168 8609624 ~ 8642039 (-)
CI01000325_08645444_08676032 NA coding upstream 121275 8644731 ~ 8676032 (-)
CI01000325_08701427_08704727 NR2E1 coding upstream 177844 8701300 ~ 8704727 (-)
CI01000325_08919961_09083730 NBAS coding upstream 396505 8919961 ~ 9083730 (-)
G467736 NA non-coding downstream 118863 8398524 ~ 8398751 (-)
G467730 NA non-coding downstream 130381 8386466 ~ 8387233 (-)
G467594 NA non-coding downstream 584302 7931169 ~ 7933312 (-)
G467703 NA non-coding downstream 620634 7893797 ~ 7896980 (-)
G467696 NA non-coding downstream 635065 7865070 ~ 7882549 (-)
G467784 NA non-coding upstream 536 8523992 ~ 8524875 (-)
G467792 NA non-coding upstream 9818 8533274 ~ 8534040 (-)
G467793 NA non-coding upstream 10653 8534109 ~ 8534326 (-)
G467796 NA non-coding upstream 18040 8541496 ~ 8541770 (-)
G467797 NA non-coding upstream 18422 8541878 ~ 8542267 (-)
G467578 NA other downstream 562422 7946345 ~ 7955192 (-)
G467570 NA other downstream 900784 7615486 ~ 7616830 (-)
G465716 NA other downstream 2889446 5626213 ~ 5628168 (-)
CI01000325_05531464_05543064 ITPK1A other downstream 2984772 5528844 ~ 5543064 (-)
CI01000325_05430077_05434997 NA other downstream 3082561 5430010 ~ 5435253 (-)
G467741 NA other upstream 155716 8679172 ~ 8697583 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other upstream 762076 9285532 ~ 9286556 (-)
G468702 NA other upstream 1643643 10023665 ~ 10193979 (-)
G468823 NA other upstream 1792674 10316130 ~ 10316685 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location