CI01000329_00428497_00432436 (DECR2)


Basic Information

Item Value
gene id CI01000329_00428497_00432436
gene name DECR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000329
NCBI id null
chromosome length 1403501
location 428497 ~ 433445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000329_00428497_00432436.mRNA
ATGGCAGAGAAACCTCAGCTGGTCAATAATTCGCCAGAGGACATCGAGACTGATGAGTGTATGAGCACATACACACACATCTACAGCCCTAATCTGCTCATTGATCAGGTGGCCTTTATAACTGGCGGAGGTTCAGGTATTGGATTTAGAATAGCAGAAGTTCTGATGCGGCATGGTTGTGACACAGTCATTGCCAGCAGAAATCTGGAGAAACTCTCTGAGGCAGCGAAGAAGTTAACCAGCACTACAGGCAGGCGATGTTTGCCAATAGCAATGGATGTGCGTCAACCAGAGACGATTTCTGCTGCCATGGATGAAACACTGAAGACATTTGGACGTGTTGACATACTTATTAACAATGCTGCAGGTAATTTCTTGTGCCCTGCTACATCGTTGTCATTTAACGCTTTCAAGACGGTAATGGAGATCGACACCATGGGAACTTTCAACACTAGTAAAGTGGTCTATGACAAATGGTTTAAGGATCATGGCGGCTCCATTGTCAACATTTCGGCCACACTGGGGTACAGAGGTCAGGCTCTCCAGGTGCATGCTGGGTCAGCAAAGGCTGCAAACGATGCCATGACAAGGCACTTAGCGGTCGAGTGGGGCCCCAGTGGTGTGAGGGTGAACACAGTGGCCCCAGGGCCCATCTCTGGCACAGAGGGATACCGTAGACTGGGTGGTTCCCATGCCGAGACAGCAGGGGTTTTCCGCAGCATCCCGTTGCAAAGAGCTGGCAATAAGACGGAGATTGCACATGCGGTTCTTTTCCTGGCCAGCCGCGCTGCTTCATACGTCACTGGAACGATACTGGTCGCCGACGGAGGGGCGTGGCTCACCTCGGCCAATGACGTGGAACGGCTGCTGGGTATTATCTCATCTCGCTCTGCAAAACTATGAACAGACAGCACCGCACACAGGTGTGTGTGCGTGAGGTAGAAGACGCGTGTTTGCTAGGATCTCAACTATTTAATAAAAATCATTTTATATAATTATGATAATTATTAGAAGGCTCAAACGCACTTATGAGAATTATTTTTCCAAATATGTGATCTGGTGAGCAAAACAATCTGATCATTTTTCTGCCACTGTGTGATTGACTTGTGAATATGTGGGTAATATCTTGGTTTATAAGATCTCATCGTAACTTCTCTTCCCTTGTGTTTCTAGGTTTTTGGTCGGCGGAGAAAAGAAAGGATAAATAGCATGACTGAAGAGGATGAAATAACAGTTGATCAGGCCAACATCTGTATGATGATAATTGTTGAAGCTCACAAAACATGTTCAGAGTATTTTCACCCCCAAAAACAAAAGTAAACAATAAGAAATTATTTTCTGCATAAAGAAAAAAAAGCCCATTTTTAGGCTTTGTGGCGTTGTGACACTGTGTATTAAAATTAAGCACATTTCCACCCTAAATTTAATTTTCATAATGTTCTGTTATACTTTTTGAGTTGTTTATTCTCATTCTTATCATTAGATTTTAAGCATAAATTAATGTCAGTACAAAAAATAATGCTATGAATTATAATTGTTACCATTTTAATCAGATTTCATTACTTTTTCCCCCTCCTTTATGGTAATGAGAAAATAGACTGCAGTTTATGCAAATATATTTTATAATTTTCTTTTGATTTTGAGGTGAGATATGAAAGATGTGTTTTTGACTGAACTTTAAGTCATATAGTATATTTATAGATCCTGCTGAACTGTGTATTTTCATTACATAGCAGTTGTCAGATATTTCAAGCATGTTTAACCACAAAGTATTAGTAATTATTCAAAATGTCTATTTTACTTCTGGTAACTACCACTCTAGCATTACGTAAAACAAAAATTAAATTTTCAGCTACAATACATTGTGGGGAAAAGTAATATTTTTGTATTCTTATATACATAAGTTTTCATA

Function

symbol description
decr2 Predicted to enable 2,4-dienoyl-CoA reductase (NADPH) activity. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be located in peroxisome. Orthologous to human DECR2 (2,4-dienoyl-CoA reductase 2).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process

KEGG:

id description
K13237 DECR2, SPS19; 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], peroxisomal

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000329_00428497_00432436.mRNA True 1912 mRNA 0.40 8 428497 433445

Neighbor

gene id symbol gene type direction distance location
CI01000329_00426815_00427667 NA coding upstream 689 426815 ~ 427808 (+)
CI01000329_00412042_00412968 H3F3AP4, H3F3C, H3F3B, H3F3A, GM6421 coding upstream 15125 412023 ~ 413393 (+)
CI01000329_00384411_00393692 WDR24 coding upstream 34731 384411 ~ 393766 (+)
CI01000329_00360998_00370013 RHBDL1 coding upstream 56617 360998 ~ 373480 (+)
CI01000329_00329479_00338686 RHOT2 coding upstream 89148 329479 ~ 339349 (+)
CI01000329_00435268_00463083 RAB11FIP3 coding downstream 1823 435268 ~ 464868 (+)
CI01000329_00467128_00475281 TELO2 coding downstream 31785 465230 ~ 475502 (+)
CI01000329_00476515_00484343 IFT140 coding downstream 43070 476515 ~ 484953 (+)
CI01000329_00501847_00507794 IFT140 coding downstream 68363 501808 ~ 508191 (+)
CI01000329_00509475_00516931 NA coding downstream 76030 509475 ~ 517002 (+)
G472576 NA non-coding upstream 19372 408230 ~ 409125 (+)
G472577 NA non-coding upstream 51718 373581 ~ 376779 (+)
G472582 NA non-coding upstream 70073 328043 ~ 358424 (+)
G472630 NA non-coding downstream 90070 523515 ~ 596838 (+)
G472633 NA non-coding downstream 154746 588191 ~ 591520 (+)
G472692 NA non-coding downstream 174418 607863 ~ 608150 (+)
G472697 NA non-coding downstream 208083 641528 ~ 642518 (+)
G472699 NA non-coding downstream 209188 642633 ~ 658323 (+)
CI01000329_00244490_00247185 NA other upstream 181340 244490 ~ 247279 (+)
CI01000329_00816766_00819185 NA other downstream 383320 816765 ~ 819185 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location