CI01000330_02590806_02597446


Basic Information

Item Value
gene id CI01000330_02590806_02597446
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 2590091 ~ 2597586 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000330_02590806_02597446.mRNA
ATATAAAAGATAAAGCAAATACCTCAAAAACCTCAGCAAACGAAACTCAAATACCTCAAAAAAACCTCATACAAATGACTCAAATACCTTAAACTCAGCAAATAAAACTCAAATACCTCAAAACCCTCAGCAAACAAAACTCATGTATCTCAAAAACATCAGCAAACAAAACTCAAATACCTCAAAAACCCCAGCAAACAAAACTCAAGTGCCTCAGAAACGAAAAGAGAACTCAAATACCTCAAAATCCTCAGCAAACAAAGTGCAAATGTGTGTAGAAACTGTAACCATTTCTTTAAAATATTTGCAGACTATTTTACAGACATAAAAATATTCTACACACAGATATCTAGTTTACATGGCACCATGTCCTTCAAATTAAACCAAAGATTTGATGCCAATTATGTGGCAAATCCACCGATTATTCATCCTCAAAAGTGGTAATTTTATCCACCTGGTCAACATAAGGGGTTTAAGGGACAGATGTCCCATAGAATATACCCTAGAATACAACCCTGTGATTTATGAGGTATGGGAATAGGTATTTTCACACATATTAAATGTAAAAGGGATTTATTTTTTATTAGGGCAGAATGCAGAAATCATGTACACATGTTCAAAAAAAGACATTAAGAATTTCACATCTCTCGTTTCACCGTAACAGTTTCCAGACAAATCTAACACTCTACACTCGCCAGCTCATAACAACAGCGACATGTTCTGCACCTTCAAAGGAGACGCAGAGAACATCTCGCATTTCCAAAAGACAGGGTTGCAGAACTGCAAGACGGGTGCCAAAGCCACTAAAATGGCCCTCAAGAGTGTTTTTGACAGAGTAGAACACATAATGCAGGTCTCAGACACTTTCTTCAGTCATCCTTTCTTGGAACCGACATCAACTATTAAAAAATCATGCCCTGTGCCAGTGCCCACATGCTCTGGCTTGGTCTCAGACAGCACATGTGGCAGCTCTCCTTCCTGTCGTTACGTCTCTCCACCGTCCCTGCCGGACATGCAGACTCTCCCCGAGGACGTGCTGTCGTCTCCACCTCTCGGCCCTCCCAATTACCTGCAGCTGTCCAAAGAGTCAGGCGGCAGCACCAGCAGCAAGAACTCCTCCTGTGACACGGACGACTTTGTGCTGGTGCCCCATCTCTCTGGAGAGCAGTCCTCTAAATTTGAGGTTTATCCTAAAAACAAGAAACACACTTAATTTAACTTATATGTTCTGAAGTCTTAATTTCTTAAAATAGTCTTAGAACAATTTTGTAAAATATTAATATTTTAATAAGTACAATATTTTAAGAATGTTTTATATGTTTACATATTTTTAACTGGAAAACTTTTCAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000330_02590806_02597446.mRNA False 1353 mRNA 0.39 5 2590091 2597586

Neighbor

gene id symbol gene type direction distance location
CI01000330_02379648_02379944 NA coding upstream 209758 2377388 ~ 2380333 (+)
CI01000330_02280397_02289394 ETFA coding upstream 300479 2280397 ~ 2289612 (+)
CI01000330_02270814_02271081 NA coding upstream 318559 2270814 ~ 2271532 (+)
CI01000330_02133497_02266195 SCAPER coding upstream 323850 2133497 ~ 2266241 (+)
CI01000330_02116696_02127182 CTDSPL2A coding upstream 462860 2116580 ~ 2127231 (+)
CI01000330_02657515_02658888 NA coding downstream 59603 2657189 ~ 2659010 (+)
CI01000330_02924840_02955205 NA coding downstream 325427 2923013 ~ 2955282 (+)
CI01000330_03068141_03070654 NA coding downstream 470236 3067822 ~ 3071125 (+)
CI01000330_03111967_03139685 RORAA, RORA coding downstream 513650 3111236 ~ 3139744 (+)
CI01000330_03149640_03168640 NA coding downstream 552054 3149640 ~ 3168824 (+)
G474780 NA non-coding upstream 67421 2522250 ~ 2522670 (+)
G474777 NA non-coding upstream 76692 2511456 ~ 2514764 (+)
G474764 NA non-coding upstream 112617 2477261 ~ 2477474 (+)
G474763 NA non-coding upstream 116364 2473397 ~ 2473727 (+)
G474647 NA non-coding upstream 152139 2434322 ~ 2437952 (+)
G474854 NA non-coding downstream 82890 2680476 ~ 2680820 (+)
G475137 NA non-coding downstream 98590 2696176 ~ 2696610 (+)
G475141 NA non-coding downstream 101159 2698745 ~ 2698977 (+)
G475148 NA non-coding downstream 104676 2702262 ~ 2702469 (+)
G475229 NA non-coding downstream 222189 2819775 ~ 2830284 (+)
G474771 NA other upstream 79921 2500102 ~ 2510170 (+)
G474750 NA other upstream 190413 2394157 ~ 2399678 (+)
CI01000330_02046876_02054740 NA other upstream 540834 2046781 ~ 2054740 (+)
G474819 NA other downstream 78326 2675912 ~ 2676442 (+)
G475235 NA other downstream 474961 3072547 ~ 3091233 (+)
G475236 NA other downstream 987889 3585475 ~ 3590497 (+)
G475421 NA other downstream 1118958 3716544 ~ 3717419 (+)
G475483 NA other downstream 1395440 3993026 ~ 3993938 (+)

Expression


Co-expression Network