G474854


Basic Information

Item Value
gene id G474854
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 2680476 ~ 2680820 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU544907
GTCCTCGCCGCACACTTTTGTTAGGTTTTATAACCTAGATGTGGCCTCTACCCCGGGGTCAAGGGTGCTGGTGTCTTAGTGTGCGCTGAACAGTTTCACACAGACAGGCACTCGGTCTTATGGCGGCGTGGGTATCTCGTTCCCAAAGCGCTTGACGCAGCGCGAGTTCCCTTGAAAGGGAACGTCTCAGGTTACGTATGTAACCATGGTTCCCTGAGAGGGAACGAGACGCTGCGTCCCGTTGCCATACTCCCTGCATGCCTGTATCGACTTACTTCGACTTTCAGAAGCTAACTCTGTTTGGTTCGGGTGTGCTTTATAGTTTCCTGGTCATGACGTCACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU544907 True 345 lncRNA 0.53 1 2680476 2680820

Neighbor

gene id symbol gene type direction distance location
CI01000330_02657515_02658888 NA coding upstream 21466 2657189 ~ 2659010 (+)
CI01000330_02590806_02597446 NA coding upstream 82890 2590091 ~ 2597586 (+)
CI01000330_02379648_02379944 NA coding upstream 300143 2377388 ~ 2380333 (+)
CI01000330_02280397_02289394 ETFA coding upstream 390864 2280397 ~ 2289612 (+)
CI01000330_02270814_02271081 NA coding upstream 408944 2270814 ~ 2271532 (+)
CI01000330_02924840_02955205 NA coding downstream 242193 2923013 ~ 2955282 (+)
CI01000330_03068141_03070654 NA coding downstream 387002 3067822 ~ 3071125 (+)
CI01000330_03111967_03139685 RORAA, RORA coding downstream 430416 3111236 ~ 3139744 (+)
CI01000330_03149640_03168640 NA coding downstream 468820 3149640 ~ 3168824 (+)
CI01000330_03172826_03180813 ANX2A, ANXA2, ANXA2A coding downstream 492006 3172826 ~ 3180946 (+)
G474784 NA non-coding upstream 43024 2544871 ~ 2637452 (+)
G474780 NA non-coding upstream 157806 2522250 ~ 2522670 (+)
G474777 NA non-coding upstream 167077 2511456 ~ 2514764 (+)
G474764 NA non-coding upstream 203002 2477261 ~ 2477474 (+)
G474763 NA non-coding upstream 206749 2473397 ~ 2473727 (+)
G475137 NA non-coding downstream 15356 2696176 ~ 2696610 (+)
G475141 NA non-coding downstream 17925 2698745 ~ 2698977 (+)
G475148 NA non-coding downstream 21442 2702262 ~ 2702469 (+)
G475229 NA non-coding downstream 138955 2819775 ~ 2830284 (+)
G475257 NA non-coding downstream 293750 2974570 ~ 2976497 (+)
G474819 NA other upstream 4034 2675912 ~ 2676442 (+)
G474807 NA other upstream 82371 2595046 ~ 2598105 (+)
G474771 NA other upstream 170306 2500102 ~ 2510170 (+)
G475235 NA other downstream 391727 3072547 ~ 3091233 (+)
G475236 NA other downstream 904655 3585475 ~ 3590497 (+)
G475421 NA other downstream 1035724 3716544 ~ 3717419 (+)
G475483 NA other downstream 1312206 3993026 ~ 3993938 (+)

Expression


Co-expression Network