CI01000339_02221790_02222160


Basic Information

Item Value
gene id CI01000339_02221790_02222160
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 2221790 ~ 2222745 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_02221790_02222160.mRNA
GTGCGTGGTAGGGAAAGATTCGAGATGCTTAAGAAGATTAATGACAGTTTGGAATTAAGTGATGTTGTGCCTCCATCTGATGTGGACAAATACCGGCAGAAATTGGTGTCAAAAAACAAAAAAGAAAGAGATGGCCAAACACCTGAGCCCAAAAGAGGGAAAAAACTGATGGTAAAGGATGAAAAGAGCGATTCTGATTAAGATGGCAGGATGCTGAAAGAAAAAGCAAAGGAGAATTTTGATATGTATATTTTTTTTACTGCCTTTATTTGACCAAAACAGCTTGTCATATAGGGAGCAATTGGTGAATTGCAGACCAATGTGATCCCTCAGTCTTGTATGTTATGTTTCATCTTGTTCACTCCACTGGGACCTGTGCAAGTCAGCTGATCCAGAAAAGTTCTGTGTGAGTAAGACTAGTAACAGCTGGGCGCTGTAGGTGGTGTAGTGCTCTTCCAGCACTGGAGGAGCAATACTGGCCCATCATTTTGCAGAGCTGATAAATTAATGTCCAGCAATGAGGCATAACTGTGTGTGGGATTTTTTTATCCTGTTGTGTAGGTCAGTGCAGGTCACTTGCCTCCTAACACTTAGTTTCCTCACTTTGGTAAGGTTGTAAAGGAGTTTGTCACTGAATTACTAGATGGACACTTTTTTAAAAATGTAGTAATGCCAGTATTTTGTAACCTGTTTTGTAACCAGCATTTCCTGAGTATGAATACTTGAATGAAAGAGTATGAATAATTAGATGAAACAAGCAGCACTGGTTACAAGCCAATAACTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_02221790_02222160.mRNA True 786 mRNA 0.40 2 2221790 2222745

Neighbor

gene id symbol gene type direction distance location
CI01000339_02215633_02219758 TP53 coding upstream 2032 2215289 ~ 2219758 (+)
CI01000339_02200730_02206209 GPS2 coding upstream 15226 2200132 ~ 2206564 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP coding upstream 23706 2196307 ~ 2198809 (+)
CI01000339_02185977_02193758 CTDNEP1.L, CTDNEP1, CTDNEP1B, CTDNEP1A, DULDA, CTDNEP1.S coding upstream 27632 2185977 ~ 2194158 (+)
CI01000339_02105984_02112628 ERCC6L coding upstream 108832 2105984 ~ 2112958 (+)
CI01000339_02250288_02256537 NA coding downstream 27049 2249794 ~ 2256894 (+)
CI01000339_02263831_02268085 SLC25A15, SLC25A15B coding downstream 41086 2263831 ~ 2268748 (+)
CI01000339_02283051_02288143 MPDU1A coding downstream 60152 2282897 ~ 2288265 (+)
CI01000339_02332203_02335402 ATP6V1A coding downstream 108865 2331610 ~ 2335402 (+)
CI01000339_02355753_02358594 ZDHHC23A coding downstream 132414 2355159 ~ 2359747 (+)
G481762 NA non-coding upstream 45490 2173776 ~ 2176300 (+)
G481793 NA non-coding upstream 81311 2140270 ~ 2140479 (+)
G481786 NA non-coding upstream 82013 2136902 ~ 2139777 (+)
G481756 NA non-coding upstream 122854 2098166 ~ 2098936 (+)
G481755 NA non-coding upstream 124315 2097153 ~ 2097475 (+)
G481809 NA non-coding downstream 6377 2229122 ~ 2229402 (+)
G481810 NA non-coding downstream 6733 2229478 ~ 2229756 (+)
G481784 NA non-coding downstream 9496 2232241 ~ 2238709 (+)
G481780 NA non-coding downstream 36470 2259215 ~ 2261865 (+)
G481760 NA non-coding downstream 81316 2304061 ~ 2313540 (+)
CI01000339_01571624_01576903 NA other upstream 644087 1571624 ~ 1577706 (+)
G481321 NA other upstream 931057 1289321 ~ 1290733 (+)
G480761 NA other upstream 1581413 634414 ~ 643423 (+)
G480663 NA other upstream 2043807 177668 ~ 177983 (+)
CI01000339_02821530_02821886 MRPL41 other downstream 598015 2820576 ~ 2823479 (+)
CI01000339_03088452_03091633 NA other downstream 865048 3088110 ~ 3091633 (+)
G483672 NA other downstream 3004578 5227323 ~ 5239784 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other downstream 3377716 5599544 ~ 5602261 (+)
CI01000339_06041909_06043927 ATP5L other downstream 3819072 6041817 ~ 6044034 (+)

Expression


Co-expression Network