CI01000339_07488905_07489450


Basic Information

Item Value
gene id CI01000339_07488905_07489450
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 7488905 ~ 7489736 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_07488905_07489450.mRNA
AACGTGATGTTGCTGCATTTGTTAGGACCAGTCAGGATATCATCATCAATCAAGTTACACTTTGTGCTGGAGCTCCGGACAGGAAAAAAAACAAACAAGAGCAACCTATTTAAATTCCTATTTATTGTATTCACTGCACTCTGTGGAACTGATCTGGAGGAGGATTACTCCGGTCAATCGCGCAATCTTACGATTATGGATTCACACTGGCTTTCAAACACAAGAATAAGACATGACTATGTGGCTCACTCAGCCAGTGTGTCACTTTTCATGGATATCGGTCAATATTTAAACTCTAATGGATATTCATTGTGATGATTAACTATATTGGGCACGTCAGCTCTTCTAAAGTGTTCACAAATGCTTATCTTTGCAGCCTACACTTTATATATATATATAAAAAAAAAAATACTAAGGAAATCCAGCAGTTTTAATACTGGGCCTATCTGAAACTTAATTTAAAAAAAAAAAAAAAAAAGGGGGTGGGGGGGGTGGACAGAAACATTTGATTTCTTTCTTTAAGGAGTACTTATTTTTGAAGCAACCCTTGTTTGGTAAAACAACTAAAAACATTTTTTTTTTTGATAAAGCAGTGTATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_07488905_07489450.mRNA True 601 mRNA 0.35 3 7488905 7489736

Neighbor

gene id symbol gene type direction distance location
CI01000339_07417547_07433615 NA coding upstream 55103 7416918 ~ 7433802 (+)
CI01000339_07306865_07312762 NA coding upstream 176085 7306650 ~ 7312820 (+)
CI01000339_07289908_07291636 RPL12 coding upstream 197269 7289908 ~ 7291636 (+)
CI01000339_07273820_07274266 NA coding upstream 214012 7273757 ~ 7274893 (+)
CI01000339_07260000_07270969 NA coding upstream 217839 7260000 ~ 7271066 (+)
CI01000339_07523519_07525853 SURF1 coding downstream 33567 7523303 ~ 7525890 (+)
CI01000339_07533234_07536497 MED22 coding downstream 43498 7533234 ~ 7536733 (+)
CI01000339_07541292_07556434 USP20 coding downstream 51556 7541292 ~ 7556458 (+)
CI01000339_07572558_07577420 NA coding downstream 82745 7572481 ~ 7577441 (+)
CI01000339_07682173_07704747 NA coding downstream 192382 7682118 ~ 7704905 (+)
G484286 NA non-coding upstream 108436 7380251 ~ 7380469 (+)
G484280 NA non-coding upstream 117262 7364238 ~ 7371643 (+)
G484279 NA non-coding upstream 117696 7363155 ~ 7371209 (+)
G484275 NA non-coding upstream 133623 7354686 ~ 7355282 (+)
G484271 NA non-coding upstream 178672 7309617 ~ 7310233 (+)
G484297 NA non-coding downstream 5098 7494834 ~ 7502139 (+)
G484290 NA non-coding downstream 30422 7520158 ~ 7522039 (+)
G484292 NA non-coding downstream 39072 7528808 ~ 7532461 (+)
G484302 NA non-coding downstream 67099 7556835 ~ 7557145 (+)
G484299 NA non-coding downstream 67615 7557351 ~ 7559026 (+)
G484172 NA other upstream 373446 7114583 ~ 7115459 (+)
G484139 NA other upstream 522759 6946386 ~ 6966146 (+)
G484134 NA other upstream 541425 6946793 ~ 6947480 (+)
CI01000339_06041909_06043927 ATP5L other upstream 1444871 6041817 ~ 6044034 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other upstream 1886644 5599544 ~ 5602261 (+)

Expression


Co-expression Network