G481810


Basic Information

Item Value
gene id G481810
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 2229478 ~ 2229756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU552901
CAGTCACTGCTGTAAAGGGTTCAAATATGCAAAAAATCCTTGAAATCTGAAGAATCTGCAGGACCTGGAGGATTTTTCTGAAGAACAGAGCTCAGTTTAACTGCTCAGGACAAACAAGAGACTCATGAACAACCATCACAAAACAAAAAAACAGTCGTAGATCATCCAGGTAACCACACACAGTATTAAGAATCAATGGTTCACAAACTTTTGAATGGGGTAATTTTAATAAATTCAGCTATTTTTTTGTCTTATGGATTATATGTAAACATCTTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU552901 True 279 lncRNA 0.34 1 2229478 2229756

Neighbor

gene id symbol gene type direction distance location
CI01000339_02221790_02222160 NA coding upstream 6733 2221790 ~ 2222745 (+)
CI01000339_02215633_02219758 TP53 coding upstream 9720 2215289 ~ 2219758 (+)
CI01000339_02200730_02206209 GPS2 coding upstream 22914 2200132 ~ 2206564 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP coding upstream 31394 2196307 ~ 2198809 (+)
CI01000339_02185977_02193758 CTDNEP1.L, CTDNEP1, CTDNEP1B, CTDNEP1A, DULDA, CTDNEP1.S coding upstream 35320 2185977 ~ 2194158 (+)
CI01000339_02250288_02256537 NA coding downstream 20038 2249794 ~ 2256894 (+)
CI01000339_02263831_02268085 SLC25A15, SLC25A15B coding downstream 34075 2263831 ~ 2268748 (+)
CI01000339_02283051_02288143 MPDU1A coding downstream 53141 2282897 ~ 2288265 (+)
CI01000339_02332203_02335402 ATP6V1A coding downstream 101854 2331610 ~ 2335402 (+)
CI01000339_02355753_02358594 ZDHHC23A coding downstream 125403 2355159 ~ 2359747 (+)
G481809 NA non-coding upstream 76 2229122 ~ 2229402 (+)
G481762 NA non-coding upstream 53178 2173776 ~ 2176300 (+)
G481793 NA non-coding upstream 88999 2140270 ~ 2140479 (+)
G481786 NA non-coding upstream 89701 2136902 ~ 2139777 (+)
G481756 NA non-coding upstream 130542 2098166 ~ 2098936 (+)
G481784 NA non-coding downstream 2485 2232241 ~ 2238709 (+)
G481780 NA non-coding downstream 29459 2259215 ~ 2261865 (+)
G481760 NA non-coding downstream 74305 2304061 ~ 2313540 (+)
G481771 NA non-coding downstream 87177 2316933 ~ 2324406 (+)
CI01000339_02369904_02370487 NA non-coding downstream 140174 2369319 ~ 2371316 (+)
CI01000339_01571624_01576903 NA other upstream 651775 1571624 ~ 1577706 (+)
G481321 NA other upstream 938745 1289321 ~ 1290733 (+)
G480761 NA other upstream 1589101 634414 ~ 643423 (+)
G480663 NA other upstream 2051495 177668 ~ 177983 (+)
CI01000339_02821530_02821886 MRPL41 other downstream 591004 2820576 ~ 2823479 (+)
CI01000339_03088452_03091633 NA other downstream 858037 3088110 ~ 3091633 (+)
G483672 NA other downstream 2997567 5227323 ~ 5239784 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other downstream 3370705 5599544 ~ 5602261 (+)
CI01000339_06041909_06043927 ATP5L other downstream 3812061 6041817 ~ 6044034 (+)

Expression


Co-expression Network