Gene
RNA
| Item | Value |
|---|---|
| gene id | G481780 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 2259215 ~ 2261865 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552868 | True | 1440 | lncRNA | 0.45 | 6 | 2259215 | 2261865 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_02250288_02256537 | NA | coding | upstream | 2321 | 2249794 ~ 2256894 (+) |
| CI01000339_02221790_02222160 | NA | coding | upstream | 36470 | 2221790 ~ 2222745 (+) |
| CI01000339_02215633_02219758 | TP53 | coding | upstream | 39457 | 2215289 ~ 2219758 (+) |
| CI01000339_02200730_02206209 | GPS2 | coding | upstream | 52651 | 2200132 ~ 2206564 (+) |
| CI01000339_02196706_02198050 | GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP | coding | upstream | 61131 | 2196307 ~ 2198809 (+) |
| CI01000339_02263831_02268085 | SLC25A15, SLC25A15B | coding | downstream | 1966 | 2263831 ~ 2268748 (+) |
| CI01000339_02283051_02288143 | MPDU1A | coding | downstream | 21032 | 2282897 ~ 2288265 (+) |
| CI01000339_02332203_02335402 | ATP6V1A | coding | downstream | 69745 | 2331610 ~ 2335402 (+) |
| CI01000339_02355753_02358594 | ZDHHC23A | coding | downstream | 93294 | 2355159 ~ 2359747 (+) |
| CI01000339_02362904_02366296 | NA | coding | downstream | 100819 | 2362684 ~ 2366500 (+) |
| G481784 | NA | non-coding | upstream | 20506 | 2232241 ~ 2238709 (+) |
| G481810 | NA | non-coding | upstream | 29459 | 2229478 ~ 2229756 (+) |
| G481809 | NA | non-coding | upstream | 29813 | 2229122 ~ 2229402 (+) |
| G481762 | NA | non-coding | upstream | 82915 | 2173776 ~ 2176300 (+) |
| G481793 | NA | non-coding | upstream | 118736 | 2140270 ~ 2140479 (+) |
| G481760 | NA | non-coding | downstream | 42196 | 2304061 ~ 2313540 (+) |
| G481771 | NA | non-coding | downstream | 55068 | 2316933 ~ 2324406 (+) |
| CI01000339_02369904_02370487 | NA | non-coding | downstream | 108065 | 2369319 ~ 2371316 (+) |
| G481860 | NA | non-coding | downstream | 170319 | 2432184 ~ 2432460 (+) |
| G481851 | NA | non-coding | downstream | 247484 | 2509349 ~ 2511174 (+) |
| CI01000339_01571624_01576903 | NA | other | upstream | 681512 | 1571624 ~ 1577706 (+) |
| G481321 | NA | other | upstream | 968482 | 1289321 ~ 1290733 (+) |
| G480761 | NA | other | upstream | 1618838 | 634414 ~ 643423 (+) |
| G480663 | NA | other | upstream | 2081232 | 177668 ~ 177983 (+) |
| CI01000339_02821530_02821886 | MRPL41 | other | downstream | 558895 | 2820576 ~ 2823479 (+) |
| CI01000339_03088452_03091633 | NA | other | downstream | 825928 | 3088110 ~ 3091633 (+) |
| G483672 | NA | other | downstream | 2965458 | 5227323 ~ 5239784 (+) |
| CI01000339_05599544_05600935 | TIMM8B.S, TIMM8B | other | downstream | 3338596 | 5599544 ~ 5602261 (+) |
| CI01000339_06041909_06043927 | ATP5L | other | downstream | 3779952 | 6041817 ~ 6044034 (+) |
