XLOC_013601


Basic Information

Item Value
gene id XLOC_013601
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 43447319 ~ 43450341 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027403
AGCGTCTTTTTGCGGTTGAAATGTGACTGAGGGAGAGAACATGAGAGATGATATTCATGTCAAGTTTAGCTTATTTCCCAACATACCTTATGATGTTGTTTCATCGTTGTTTCGCGGTAAACCAACAGCAGGATAAAGCAGAGGAAGTGTGGTTCACGCGTACTTTGCATAGACTGTATGCTGCCAGCATTAAGTGTGCTTCGACGGCCGCGGCTGGACTGTTGTGGAGCAGTTACAAACACGTGAAGTTGGATACTTCGCACGTATCATAGTACGTATTGACGATGATCACATGGTTTTTGCACAcacgaattaccatgtttgtaaacattcaggatgcgcgcgcagcgAGGAGGCAGAAAAAAAACCGggagcactagcatttacagcgagggaatgacatcccaTGCGGTacttgttgttgtcttagaaataagttatattgataaCATATTcacttatatattatttacataatgctttcagcgtgtTATGACAGCTTGTCactcagtgataagcacagtgattcggcaaaattaacgttaaagtgagcggcgttcatctgacaggaccatttgcgatagcaccttCCCAAAgaatattggataagacaaaatgaccgagcatccagcccgaaatttacaatctcattgaaactccaagtgattttacaagagagaagttaaaggtctacaagtctttgaaTGCCAATGTTGTTCTgggtggtcatgtgcaagaaataatttTCGATGATTATCAGATTCAACACTAtttagtgctaaaaaccgaggttctgccaaGACAAGAAAAGAAGACGAAACTGTACAAGGCCTgcaatcatcaacaagcaaaacaactgcattctgtcAGCGAACTGCAGGGTATGTGAACTCacatatagagGAGAAGGAAACGTGTGAAGGTTTAAAAGCAAGGTTGGTTTAGTCAATCAAAAAGCTTCCAGCACAACAAAGTCCAAATGAATATTTTGGATCAGTATGCATGAAAAACAACTGTCAGCTGTCAAAAACAGCCATACCAGGACAGGCCATTTGGGACGCGAAACAATTTGAGAGTGTGGGATTTTACCACAACCACCAAATGCCCAATCAGACAGAGAAAATGTCTGGCAGGGCCTGCCGCTCTAGTGGACACAGGGAATAAAACAGCTTTGTGATGGATTTAATGGCACATCACAGTCACTGAGAAAATCATCCTGCCTTTCCAATCAAATGAGAATGAATGCCTTGCGAGCTATAAAACCTGAATGATGTTCTCCAGTACAAAATATTTGCAAGTACATCTGCTACAGGTTATAACAAAGCAATCTTCAATGTACCATCTGTGATCAGAATACTGAAGAACAGCAGCAACTTTAAATGTACTCTCTATTTGCTCATCTTTTACtttttgagtttctgtcttctgtcttctgttgaac

Function

GO:

id name namespace
GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027403 True 1441 lncRNA 0.41 3 43447319 43450341

Neighbor

gene id symbol gene type direction distance location
XLOC_013600 NA coding downstream 588063 42858003 ~ 42859256 (-)
XLOC_013599 ttc36 coding downstream 616756 42781622 ~ 42830563 (-)
XLOC_013598 NA coding downstream 840650 42460888 ~ 42606669 (-)
XLOC_013597 cntn5 coding downstream 1052158 42150947 ~ 42395161 (-)
XLOC_013596 arhgap42b coding downstream 1375443 41857403 ~ 42071876 (-)
XLOC_013602 NA coding upstream 139203 43589544 ~ 43592912 (-)
XLOC_013603 NA coding upstream 165366 43615707 ~ 43647433 (-)
XLOC_013604 treh coding upstream 396595 43846936 ~ 43884044 (-)
XLOC_013605 NA coding upstream 442496 43892837 ~ 43894135 (-)
XLOC_013606 bcl9l coding upstream 445812 43896153 ~ 43993634 (-)
XLOC_013384 BX323829.1 misc downstream 23905088 19542102 ~ 19542231 (-)
XLOC_013592 NA non-coding downstream 1903137 41542542 ~ 41544182 (-)
XLOC_013590 NA non-coding downstream 2095836 41350989 ~ 41351483 (-)
XLOC_013589 NA non-coding downstream 2102498 41343806 ~ 41344821 (-)
XLOC_013608 NA non-coding upstream 807416 44257757 ~ 44258660 (-)
XLOC_013615 NA non-coding upstream 1181230 44631571 ~ 44634146 (-)

Expression


Co-expression Network