G492381


Basic Information

Item Value
gene id G492381
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10787967 ~ 10788183 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564787
GATTTTTTTTAAAAAAAATTTTGCTTTGACATTAGTGGCAAAAGCCAATTATTCAAGGGTGTAATTTTGGTTTGAACATTAGGTAAAAATTTACAACAGCGCATAAAAATGTGGTCTGAGTTTCACAAACAAAAACCACAGCCAGGCTGAATGAAAATTTAAATCCACTCTCTGTCAGTAGGTGGCGCTTATGGAACAGCTTAATTAGAGCGGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564787 True 217 lncRNA 0.35 1 10787967 10788183

Neighbor

gene id symbol gene type direction distance location
CI01000340_10690474_10697545 IP6K2, IP6K2A coding downstream 88376 10689932 ~ 10699591 (-)
CI01000340_10667602_10671566 SC61A, SEC61A1.S, S61A1, SEC61A1L, SEC61A1 coding downstream 116401 10667532 ~ 10671566 (-)
CI01000340_10664417_10665925 EMC3, POB, EMC3.L coding downstream 122042 10664104 ~ 10665925 (-)
CI01000340_10648767_10660257 USP4 coding downstream 127710 10648548 ~ 10660257 (-)
CI01000340_10626938_10643520 FANCD2 coding downstream 143754 10626821 ~ 10644213 (-)
CI01000340_10924696_10934000 EDEM1 coding upstream 136201 10924384 ~ 10934000 (-)
CI01000340_10935675_10941448 ARL8B, ARL8BA, ARL8A coding upstream 147149 10935332 ~ 10941681 (-)
CI01000340_10951922_10954429 NA coding upstream 163651 10951834 ~ 10954436 (-)
CI01000340_10962027_10966453 NA coding upstream 173541 10961724 ~ 10967360 (-)
CI01000340_10980323_10984372 GLYCTK coding upstream 191903 10980086 ~ 10984372 (-)
G492371 NA non-coding downstream 3062 10781383 ~ 10784905 (-)
G492364 NA non-coding downstream 35021 10752728 ~ 10752946 (-)
G492343 NA non-coding downstream 108371 10679318 ~ 10679596 (-)
CI01000340_10468562_10470670 CAV3 non-coding downstream 316129 10468063 ~ 10472083 (-)
G492047 NA non-coding downstream 434018 10350057 ~ 10353949 (-)
G492356 NA non-coding upstream 5076 10793259 ~ 10797269 (-)
G492385 NA non-coding upstream 38016 10826199 ~ 10826420 (-)
G492392 NA non-coding upstream 53270 10841453 ~ 10841670 (-)
G492400 NA non-coding upstream 72248 10860431 ~ 10860700 (-)
G492551 NA non-coding upstream 127139 10915322 ~ 10916667 (-)
CI01000340_10357202_10357606 NA other downstream 425563 10356758 ~ 10359856 (-)
CI01000340_10025958_10028902 SRSF3 other downstream 759984 10025656 ~ 10029589 (-)
G491712 NA other downstream 1988390 8799201 ~ 8799577 (-)
G489511 NA other downstream 4460595 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 4567325 6095704 ~ 6194501 (-)
G493109 NA other upstream 885563 11673746 ~ 11677994 (-)
G493266 NA other upstream 1278994 12067177 ~ 12116900 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other upstream 1824033 12577435 ~ 12625758 (-)
CI01000340_14318434_14336130 NA other upstream 3425165 14318365 ~ 14336258 (-)
CI01000340_14547725_14551493 NA other upstream 3758816 14546999 ~ 14552983 (-)

Expression


Co-expression Network