CI01000344_01224910_01235323 (MAN2B2)


Basic Information

Item Value
gene id CI01000344_01224910_01235323
gene name MAN2B2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000344
NCBI id null
chromosome length 3248351
location 1224564 ~ 1235323 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000344_01224910_01235323.mRNA
TCTCTGAAAACGATGCGGTGGAGAAGATTCAAGCTTTCGTCATTCCTCACAGTCACATGGATGTTGGCTGGGTGTACACCGTCCAGGAGAGCATGCATGCGTATGCCAGCAATGTGTACAGCAGTGTAGTTGAAGAGCTGTCAAGAGTCAAAAGCCGCAAGTTCATCGCAGTTGAACAGGAGTTTTTCCGACTCTGGTGGGTGAATGTGGCATCAGATTGGCACAAGAAACAGGTGAGACAGCTGTTGCACGAGGGTCGTCTGGAGTTTATAATCGGTGGTCAGGTGATGCATGATGAAGCTGTGACAGATGTAGATGATGCCATTCTTCAACTCACAGAGGGTCATGGCTTCTTGTATGAGACTTTTGGTGTTCGGCCACGTTTTGCATGGCATGTTGATCCATTTGGTGCATCAGCCACCACCCCCATTCTCTTTGCCCTGGCAGGGTTTGACGCTCACCTCATCTCTCGCATCGACTACGACCTTAAAGATGACATGCAGAAAAACCAGAAATTGCAGTTTGTGTGGAGAGGTTCTCCCTCCTTAAAGGAAAAACAAGAGATATTCACACACACCATGGACCAGTTCAGCTACTGCACACCATCATACCTACCCTTCTCGAACAGGTCTGGGTTTTACTGGAATGGTGTTGCCTTGTTTCCGGACCCTCCTAAAGATGGCATATACCCTAACATGAGTCTGCCAGTGACCAAGGAAACTGTAGAGCTTTATGCACAAACCATGGTGGACAACATCAGAATGAGGGCCCAGTGGTTCAGAACCAGCCATGTTCTCTGGCCTTGGGGTTGTGACAAGCAGTTCTACAATGCATCAGTGCAATTCATGAACATGGATGTTTTAATGAACTACATTAATGCACACAGTGACAAGTATGGAGTTGCAGTTCAGTATGCTACGCTAAAGGACTATTTCCAGATGTTGCACCAAACAAATCTGTCCTGGGATGTGAGGGAAAACCAAGACTTCCTTCCTTACTCAACAGAACCGTTTCAGGCATGGACGGGGTTCTATGGTTCCAGAAATGTTCTGAAAGGAGTGGCCAGACGAGCGAGTTCCCTCTTGTATGCAGCAGAGTCTCTCTTCACTAGATACCGCATCAGCTACCCAGAAGGCCCGGTTCAGAGAGAGTGGGCTCTAGACAAACTCAAGGCCCTGCGATGGGCTGTTTCTGAGGTTCAGCATCATGATGGCATCACAGGGACAGAATCACCCAAAGTGGCTGATATGTACATGGAGCATCTCATGCAAGGCATGATGGGAGCTGAGGAACTCTTGGCAGCCATTTTCTTGCTTCCACAGACCATCGAACCTTCCAATGACATCCATCACCCATCCCAAACCAGACCCACCACATTGAAGACTGACTCAGGAAATGTTCTTGAACAGCATATCATCGTGTACAACCCCCTAGCCTGGAACATTTCAACTTATATTAATATTTCTGTGCCATATGCAATGGCAGTTGTGCTTGATGATGATGGAAAAGCAGTACCTGCTCAGATCCAGCAATCGATGGAGTCTTCCACTGACTACGATCTCTTCTTCGTTGTTGAGCTGGGTGGACTGCAGTACAGAAAGTACATTGTGCAGTTCCCACAATCCCACTGTGACACTGGCTCTGCTTGTGGGTCGACTCATGTGGCCAGAGTAGTGAAATTTAAGAAGAAGAATACCTTGCTTTTCCATTATAGGTGCAAAAAGATGAGAGTTAGAGTACAGCAGGACTTTTGGGAGTATGTGGCCAACGGGGACATCCACTCTGGGCCAATCTCAGACAACTACATCTTTACTGCTAACGGCTCTGCTATTCCTGCATACAAATCTGTGGCCATGGAGATTGTGCCGGGGAAGATAGTTTCAGAGATACGTCAGTATTTCTACAGGGAGGAGGAAGACAAAAATCACACTTACTCCGTGGTCACCAGAGTGCCGGTAGGGTTTCAGGGTCGGCTGGCGTGCTTCAGACTGGAGCAGAGCTATAAAGTGGGACCCCTACAGGTGAACCGAGAGACCGTGTTCAGAACCCGCACGAGTCTGCAGAATAACAAAACACTGTTTACTGACAACAATGGCTATCAGATGATGAAAAGGACATTCAAGAGCTTTGTCAACAACACAGTCTCTCGTAATTACTACCCAATGGTACGAGCGGCCTACATAGAAGATGATTCCAGCAGACTTGTGTTCCTCAGTGAAAGAGCTCATGGAGTGGCCAGTCTGAGTCAGGGTCAACTAGAAGTTATGCTTCATAGACGGCTTTGGAACAACCAGGAGTGGAATCTGGGCTATAACCTGACTCTCAATGACTCTTCTGTGGTGCGGCCTGTTCTTTGGATGATGCTGGGCTCCCCTGCTGCAATATCATCCATCTACCAACAGGAGGCACTAGAGCTGCAGCACAGACCAGTGGTTATGCCTATTGACCAACCCCAAAAGCCATTCAATCAGAGAGAGAAATTTAATGGGCCGTCTGTTCAGCCGGTTGTGCTTCCCCAGAACCTCCACATGCAGACCCTCAGCATCCCTGGCTGGAACTACAGTCCTGATCACACCCAGCACATCCACAATCTCAGCGCAGGTGGAGAGAGAAAAATAGACTTTGACCGTATTCTTTTGAGGATTACACACCTGTATGAATTAGGAGAAGACCCAGTCTTATCGCAACCCATCACTATTAACCTGAAGGAAGTTATGCGGGGCATAGGAGAGATAACTGAAGTGCAGGAGCGTTCACTTACTGGAACATGGGATATATCAGACCTCCAGAGGTGGAGCTGGAAAACCAATGAAAGAGTACTAAAAGAAAAGGAAGCAGATGTTTTCAGTGGCGTAACCCAGGACTTCAATGTGACCATTCACCCGAAGGAGATCAGAACCTTTTTCATTTACTTTAAATAGACTGTTTTACAGAAGCTGATGATTGTCTTCTGTGAAGATTCTTTATTAAGATTATTTCTAATGTGTCAGTAATGATTTTAAGATGTGCACAATTTGAATCATTAAAACTTTAAAAATTTTTCTTTGTGTTTTTCTTAGGATAAATGTTGTAAGTGTTAAGCATCTTTTTTTTTTATTTAGTTCAATCACAGACAAGTACAATTCAAAAGTACAAGGCAAAAATAAGGCATTGTGATACAGTTCAGGGTATGTGAAACAGAATAACAGCATATAAAACATAAAATTAACATATATGTAAAAAAAATAAAATATAAAATCCAAAAAGAAATAGAAAAAGGGCAATAAA

Function

symbol description
man2b2 Predicted to enable several functions, including hydrolase activity, hydrolyzing O-glycosyl compounds; lytic transglycosylase activity; and metal ion binding activity. Predicted to act upstream of or within mannose metabolic process. Orthologous to human MAN2B2 (mannosidase alpha class 2B member 2).

GO: NA

KEGG:

id description
K12312 MAN2B2; epididymis-specific alpha-mannosidase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000344_01224910_01235323.mRNA True 3267 mRNA 0.45 19 1224564 1235323

Neighbor

gene id symbol gene type direction distance location
CI01000344_01178860_01181710 NA coding downstream 42226 1178860 ~ 1182338 (-)
CI01000344_01148037_01163418 NTN4 coding downstream 61146 1147735 ~ 1163418 (-)
CI01000344_01024079_01086671 NA coding downstream 137893 1023396 ~ 1086671 (-)
CI01000344_00982486_01019957 KIRREL, KIRRELA coding downstream 204530 982228 ~ 1020149 (-)
CI01000344_00960146_00977733 NDUFS2, NDUFS2.L coding downstream 245112 960027 ~ 979452 (-)
CI01000344_01243421_01244832 CCNB1IP1 coding upstream 7852 1243175 ~ 1244872 (-)
CI01000344_01274460_01279238 OXA1L coding upstream 39137 1274460 ~ 1279516 (-)
CI01000344_01296456_01300324 NA coding upstream 60932 1296255 ~ 1301038 (-)
CI01000344_01304721_01306012 NA coding upstream 69266 1304589 ~ 1306012 (-)
CI01000344_01431820_01432444 NA coding upstream 196388 1431711 ~ 1432444 (-)
G499782 NA non-coding downstream 7289 1217005 ~ 1217275 (-)
G499666 NA non-coding downstream 14109 1209867 ~ 1210455 (-)
G499701 NA non-coding downstream 16557 1207124 ~ 1208007 (-)
G499779 NA non-coding downstream 56121 1167189 ~ 1168443 (-)
G499683 NA non-coding downstream 178504 1044130 ~ 1046060 (-)
G499693 NA non-coding upstream 18717 1254040 ~ 1256129 (-)
G499784 NA non-coding upstream 51828 1287151 ~ 1287765 (-)
G499785 NA non-coding upstream 52897 1288220 ~ 1288479 (-)
G499690 NA non-coding upstream 98462 1333785 ~ 1338281 (-)
G499788 NA non-coding upstream 104034 1339357 ~ 1339600 (-)
G499686 NA other downstream 51573 1169109 ~ 1172991 (-)
CI01000344_00954563_00959583 NA other downstream 264872 953725 ~ 959848 (-)
CI01000344_00648763_00666641 DTX1 other downstream 556418 648763 ~ 666648 (-)
G499520 NA other downstream 884699 337073 ~ 339865 (-)
G499691 NA other upstream 458 1235781 ~ 1240682 (-)
G499804 NA other upstream 178693 1414016 ~ 1419068 (-)
G499807 NA other upstream 187028 1422351 ~ 1423174 (-)
CI01000344_01794474_01807109 NTN5 other upstream 571337 1793652 ~ 1807701 (-)
G499994 NA other upstream 883048 2118371 ~ 2120477 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034642 man2b2 coding NC_007118.7 CM002891.2 19509888 ~ 19526721 (-)