XLOC_014015 (kcnh8)


Basic Information

Item Value
gene id XLOC_014015
gene name kcnh8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 20495249 ~ 20645531 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027981
TGCCCGCGCGCTCGTGAAGGAACGGGATCCTCCGTGTCTCAGTCCGCTGAAAGCTCAGTTTCACCGGAGTGCATCAAACAGAATCCATACCTTTGTCTCTGACATCGCAGCATCACTTTGATGGGGAATACGATATCAGGGCGGGAAAATGCCTGTTATGAAGGGATTGCTCGCTCCACAGAACACATTTTTGGATACTATAGCGACGCGTTTTGACGGCACACACAGCAACTTCATTCTGGCCAATGCACAAGTGTCCAAAGGCTTCCCGATTGTGTACTGCTCGGATGGATTCTGTGAACTCACTGGATTTGCCCGAACTGAGGTCATGCAACAGAGCTGCGCATGCAAGTTTCTGTACGGACCGGAGACCAGCGAGCACATAATTCTTCACGTGGACGCGGCACTCGAGGAACGGAGCGAGCTCAAGGAGGAAATAATGTTCTACAAAAAGAGTGGTAGTGTTTTTTGGTGTCTGCTGGATATTGTGCCTATTAAGAATGAGAAAGGAGATGTCGTGCTGTTCCTCGCCTCTTTTAAAGACGTCACCGACACCAAAGCCAAATCTACACTTGAGGAGAAGAAAGAAGAGTGCCGGCGTGAGAAGGTCAAGGGAGACTCTCCGTTTGGCTCCACGAGACTGCGATCAAGCACAGTTCTCTACCACATTTCAGGACACCTGCACAACCGTCAGAAACAGAGCAAAATTAAACTTAACAAGAATGTGTTTGGGGATCCACCCGCTCTGCCTGAATATAAAGTCGCTGATGCCAAGAAATCCAAGTTCATTCTTCTCCACTTCAGCACCTTTAAAGCAGGCTGGGATTGGCTGATCCTTCTGGCTACCTTTTATGTGGCTGTTACGGTGCCGTACAATGTTTGTTTTATAGGTGATCAAGATTTGACACGCAGCACCACCGTCACTGACATTGCTGTTGAGATACTCTTTATCATTGACATCGTGTTTAGTTTCCGCACGACGTATGTGAGTAAGTCTGGGCAGGTGATCTTCGATGCTCGGCAGATCTGCATCCATTACATGACCACCTGGTTCATCATCGACCTGGTTGCTGCTCTCCCCTTTGATCTTCTTTACGCTTTCAAAGTCAGCGTGGTGTCAGTGGTCCATCTGCTAAAGACCGTCCGCCTGCTGAGACTCCTGCGTCTGCTGCAGAAGATGGACCGCTACTCCCAGCACAGTACGGTGGTGCTGACCCTGCTCATGTCCATGTTTGCTCTGTTGGCCCACTGGATGGCTTGCATCTGGTACATCATTGGCAAGAAGGAGGTGGAGAGTAACGCAGACACCTGGGATATTGGTTGGCTGCATGAGCTGGGCAAGCGTTTGGAGTCTCCATACGAGGGGGTGGCCAACAGAACGCTGAGCAGCGGACCATCTTTACGGAGCATCTACATCGCAGCGCTGTACTTCACCCTCAGCAGCCTGACCAGCGTGGGCTTCGGAAATGTCTCTGCCAACACAGACGCAGAGAAGATCTTCTCCATCTGCACCATGCTCatcggagCGTTGATGCACGCTCTGGTCTTCGGTAATGTGACAGCCATCATTCAGCGCATGTACTCCCGTTGGTCCTCTTACCACACGCGCACTAAAGACCTGAAGGACTTCATCCGTGTACACCACCTGCCTCAGAGCCTCAAACAGCGCATGTTGGAGTACTTTCAGACCACCTGGTCTGTCAACAACGGCATTGACTCCAATGAGCTTCTAAGAGATTTTCCGGATGAGTTGCGTTCGGACATTGCAATGCACCTGAATAAAGAGATCCTAGAGCTGTCGGTCTTCTCGTCTCTGAGTCGTGGGTGtctccgctctctctctctgcacaTAAAGACTTCCTTCTGCGCACCGGGCGAGTACCTTCTGCGTCAGGGAGATGCTCTACAGGCCCTTTTCTTCGTCTGCTCTGGCTCTATGGAGGTGCTCAAGGACAACATGGTGCTTGCCATTCTCGGTAAAGGTGACCTGATTGGTGCAAACATGTCGGTTGGTGACCGTGTCATAAAGACGAATGCTGATGTGAAGGCGCTAACCTACTGCGACCTACAGTGCATTAATCTGAGGGGTCTGTATGAGGTGCTGGATCTGTATCCTGAATACTCTCACCGGTTTGTGCAGGATATCACACATGACCTCACCTACAACCTGAGAGAGGGCCAAGAGAGCCATGTCATATCCAGGATGTCCAGTAAGTCCATGGACACACAGATGGAGGGGAGGGGAAACGGAGATGCGATCCAGTGCTATCCACCAATAGCTGAGCATCACAATGAAGAAGATGACGATGACGACGACGATGAAGATGATCAGATACAGTACCTCAGCGGTGGAGGCAAACAGAAAACACACATGCAGAAAAATGATCACCAAACCAACAAAAAGCTCCACATTCAGCACACCACTGTCACGAAACCTGACCTCGGAAATCTCAGCCCAAGggtcGTGGACGGCACGGAGGACAGTGATGGCACAGAAAACTCCCACACGTTCATATTTTCCTCTGCTCATCAGCACAGCGTCAGTGGTGCGACCAACACCACTGCCACCACAGCAGAATTAGCTGCTAAATCGGAGGACACCCGAGGACAGCTACGCCATCTTAACCAAGAGGTGAGTTCCCTGGGACGAGAGGTGGCTGAACTGGGACGAGTCATGCGGAGTCTTGCCTTTCTCATCGAATCCATGATGGCTTCACCACAAACACCAGGTGTCTACACATCCACCTTTACCTCGGGACATCCCTCTCCTCCCGTCCCCTTCCAAGGCCAGGGCTCATCCTGGTCCAGCCCAAATTTTCCTTCGCCGATGCACCCCGGAATACATCCTGGAGGCCTTATATCGCTTCCACTCAGACCACAAGAACTACAGGTGCTCTGCCCAACCACATCTCCGGGTTCCTTTCCCATTGCACTTTCCACAACACCACATATGGACAGATTCAGACAGCCGTTACTGACCCTTTCTCCACACAGTGCAGTCGCCCGGACCCGCTCGCAAAGCCTGGAGACACCTCATCCACAACATCACCAACACATCCCACATGCCCCTGGAACTTTACCCCGAGTGGGACAGCCATCGCTGGGAGAAGGGGAGGATCTCAGGTCCCTAGGTTTGTAGCAATTAACCTTCAAAACAGACAAGTTCCACTGGAAAAAAAACCTGCGTGTTGACCTGGACTCAGGACTGGACTGATCAGATAAGTGGTACACGCACTGCCAAAGCCATGGAGCAATGGTTCCTTCGAAGATTTACGTGTTTACCATCTCAGTTTTTAAGATAATCTATCTAACGGCATGTCTTTCAATACTAGAAGCTAAAGGGATATCTcgagataaataaaaaaaaacttgtttgcgCTCGGAAATAGTGCATTTTACAATTAGCACAAATATGCAGCAGGTAATACCTTGAACTGCAAATCATTATTTGATGGGAGGCTAACAAATGATTAAATTAGTACATAATATTGAGTTTTGACTAAACATGGATGTCACTAACATGAATAGTTTTGAAGTGCTCACATGCAAAACTTACAGCAAATGCAAGAGAATGATTTCTGGTATGCTAGGAGAAGCAGAACGACTTATCAGTTTACCGCCCGGGGTCATCGTGTTGTGAAAATCATTATCAGACCATTAAGGGGATAGTTTACCACAAAAGAAAAATTTACTcatcaattactcac
>TCONS_00027982
gttggcatgggtttcctctgggtgctccggtttcccccacagtccaaagacatgtggcataagtgaattggataaacaaaattggctataatgtatgagtgtgtgtgaatgagtgagtgtatggttgttttccagtacaaagttgcagcttgaagggcatctactgcataaaacatatcctagaagttggcggctcattctgtTGTAATGACCCCCAacaaataaaggactaagccgaaggaaaataatgaatgaaatgcCAGTGACAATAAATAATAGTGGGCTAATTTtatctctttttttatattattctttGTGTTTGAAACAGACAGCAACTTCATTCTGGCCAATGCACAAGTGTCCAAAGGCTTCCCGATTGTGTACTGCTCGGATGGATTCTGTGAACTCACTGGATTTGCCCGAACTGAGGTCATGCAACAGAGCTGCGCATGCAAGTTTCTGTACGGACCGGAGACCAGCGAGCACATAATTCTTCACGTGGACGCGGCACTCGAGGAACGGAGCGAGCTCAAGGAGGAAATAATGTTCTACAAAAAGAGTGGTAGTGTTTTTTGGTGTCTGCTGGATATTGTGCCTATTAAGAATGAGAAAGGAGATGTCGTGCTGTTCCTCGCCTCTTTTAAAGACGTCACCGACACCAAAGCCAAATCTACACTTGAGGAGAAGAAAGAAGAGTGCCGGCGTGAGAAGGTCAAGGGAGACTCTCCGTTTGGCTCCACGAGACTGCGATCAAGCACAGTTCTCTACCACATTTCAGGACACCTGCACAACCGTCAGAAACAGAGCAAAATTAAACTTAACAAGAATGTGTTTGGGGATCCACCCGCTCTGCCTGAATATAAAGTCGCTGATGCCAAGAAATCCAAGTTCATTCTTCTCCACTTCAGCACCTTTAAAGCAGGCTGGGATTGGCTGATCCTTCTGGCTACCTTTTATGTGGCTGTTACGGTGCCGTACAATGTTTGTTTTATAGGTGATCAAGATTTGACACGCAGCACCACCGTCACTGACATTGCTGTTGAGATACTCTTTATCATTGACATCGTGTTTAGTTTCCGCACGACGTATGTGAGTAAGTCTGGGCAGGTGATCTTCGATGCTCGGCAGATCTGCATCCATTACATGACCACCTGGTTCATCATCGACCTGGTTGCTGCTCTCCCCTTTGATCTTCTTTACGCTTTCAAAGTCAGCGTGGTGTCAGTGGTCCATCTGCTAAAGACCGTCCGCCTGCTGAGACTCCTGCGTCTGCTGCAGAAGATGGACCGCTACTCCCAGCACAGTACGGTGGTGCTGACCCTGCTCATGTCCATGTTTGCTCTGTTGGCCCACTGGATGGCTTGCATCTGGTACATCATTGGCAAGAAGGAGGTGGAGAGTAACGCAGACACCTGGGATATTGGTTGGCTGCATGAGCTGGGCAAGCGTTTGGAGTCTCCATACGAGGGGGTGGCCAACAGAACGCTGAGCAGCGGACCATCTTTACGGAGCATCTACATCGCAGCGCTGTACTTCACCCTCAGCAGCCTGACCAGCGTGGGCTTCGGAAATGTCTCTGCCAACACAGACGCAGAGAAGATCTTCTCCATCTGCACCATGCTCatcggagCGTTGATGCACGCTCTGGTCTTCGGTAATGTGACAGCCATCATTCAGCGCATGTACTCCCGTTGGTCCTCTTACCACACGCGCACTAAAGACCTGAAGGACTTCATCCGTGTACACCACCTGCCTCAGAGCCTCAAACAGCGCATGTTGGAGTACTTTCAGACCACCTGGTCTGTCAACAACGGCATTGACTCCAATGAGCTTCTAAGAGATTTTCCGGATGAGTTGCGTTCGGACATTGCAATGCACCTGAATAAAGAGATCCTAGAGCTGTCGGTCTTCTCGTCTCTGAGTCGTGGGTGtctccgctctctctctctgcacaTAAAGACTTCCTTCTGCGCACCGGGCGAGTACCTTCTGCGTCAGGGAGATGCTCTACAGGCCCTTTTCTTCGTCTGCTCTGGCTCTATGGAGGTGCTCAAGGACAACATGGTGCTTGCCATTCTCGGTAAAGGTGACCTGATTGGTGCAAACATGTCGGTTGGTGACCGTGTCATAAAGACGAATGCTGATGTGAAGGCGCTAACCTACTGCGACCTACAGTGCATTAATCTGAGGGGTCTGTATGAGGTGCTGGATCTGTATCCTGAATACTCTCACCGGTTTGTGCAGGATATCACACATGACCTCACCTACAACCTGAGAGAGGGCCAAGAGAGCCATGTCATATCCAGGATGTCCAGTAAGTCCATGGACACACAGATGGAGGGGAGGGGAAACGGAGATGCGATCCAGTGCTATCCACCAATAGCTGAGCATCACAATGAAGAAGATGACGATGACGACGACGATGAAGATGATCAGATACAGTACCTCAGCGGTGGAGGCAAACAGAAAACACACATGCAGAAAAATGATCACCAAACCAACAAAAAGCTCCACATTCAGCACACCACTGTCACGAAACCTGACCTCGGAAATCTCAGCCCAAGggtcGTGGACGGCACGGAGGACAGTGATGGCACAGAAAACTCCCACACGTTCATATTTTCCTCTGCTCATCAGCACAGCGTCAGTGGTGCGACCAACACCACTGCCACCACAGCAGAATTAGCTGCTAAATCGGAGGACACCCGAGGACAGCTACGCCATCTTAACCAAGAGGTGAGTTCCCTGGGACGAGAGGTGGCTGAACTGGGACGAGTCATGCGGAGTCTTGCCTTTCTCATCGAATCCATGATGGCTTCACCACAAACACCAGGTGTCTACACATCCACCTTTACCTCGGGACATCCCTCTCCTCCCGTCCCCTTCCAAGGCCAGGGCTCATCCTGGTCCAGCCCAAATTTTCCTTCGCCGATGCACCCCGGAATACATCCTGGAGGCCTTATATCGCTTCCACTCAGACCACAAGAACTACAGGTGCTCTGCCCAACCACATCTCCGGGTTCCTTTCCCATTGCACTTTCCACAACACCACATATGGACAGATTCAGACAGCCGTTACTGACCCTTTCTCCACACAGTGCAGTCGCCCGGACCCGCTCGCAAAGCCTGGAGACACCTCATCCACAACATCACCAACACATCCCACATGCCCCTGGAACTTTACCCCGAGTGGGACAGCCATCGCTGGGAGAAGGGGAGGATCTCAGGTCCCTAGGTTTGTAG
>TCONS_00029712
CTGCCTGTCTCAGGTTGGCTGCATGAGCTGGGCAAGCGTTTGGAGTCTCCATACGAGGGGGTGGCCAACAGAACGCTGAGCAGCGGACCATCTTTACGGAGCATCTACATCGCAGCGCTGTACTTCACCCTCAGCAGCCTGACCAGCGTGGGCTTCGGAAATGTCTCTGCCAACACAGACGCAGAGAAGATCTTCTCCATCTGCACCATGCTCatcggaggtgtgtgtgtgcgtgtctatgTGTTTGCTGAAAGGGTGaagtttaacagatatttttaggTGTATTTGGAGGTTGAGCAAATTTGGAGTATAATTGGGATCCAGAAAatggagggtgtgtgtgtgtgtgtctgtggcttCTTCAGGGACTAAAAATAAGGT

Function

symbol description
kcnh8 Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of membrane potential. Predicted to act upstream of or within potassium ion transport; regulation of ion transmembrane transport; and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in ovary and testis. Orthologous to human KCNH8 (potassium voltage-gated channel subfamily H member 8).

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0042391 regulation of membrane potential biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005216 ion channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-060503-204 Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and regulation of membrane potential. Predicted to act upstream of or within potassium ion transport; regulation of ion transmembrane transport; and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in ovary and testis. Orthologous to human KCNH8 (potassium voltage-gated channel subfamily H member 8).

Ensembl:

ensembl_id ENSDARG00000062640

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027981 False 3707 mRNA 0.49 16 20495249 20645531
TCONS_00027982 False 3243 mRNA 0.50 15 20540843 20644963
TCONS_00029712 True 381 lncRNA 0.50 1 20594301 20594681

Neighbor

gene id symbol gene type direction distance location
XLOC_014014 NA coding upstream 185990 20308890 ~ 20309259 (+)
XLOC_014013 oxnad1 coding upstream 201365 20274264 ~ 20293884 (+)
XLOC_014012 igf2bp3 coding upstream 247913 20201254 ~ 20247336 (+)
XLOC_014011 tra2a coding upstream 303871 20177208 ~ 20191378 (+)
XLOC_014010 ccdc126 coding upstream 318247 20163826 ~ 20177002 (+)
XLOC_014016 NA coding downstream 19806 20665337 ~ 20668756 (+)
XLOC_014017 NA coding downstream 42078 20687609 ~ 20701153 (+)
XLOC_014018 rab5aa coding downstream 62929 20708460 ~ 20722368 (+)
XLOC_014019 kat2b coding downstream 78816 20724347 ~ 20755146 (+)
XLOC_014020 nutf2l coding downstream 132480 20778011 ~ 20783758 (+)
XLOC_014004 CR382300.1 non-coding upstream 711625 19782413 ~ 19783624 (+)
XLOC_014003 mir196a-2 non-coding upstream 747555 19747619 ~ 19747694 (+)
XLOC_013994 CR626877.1 non-coding upstream 1230368 19264759 ~ 19264881 (+)
XLOC_013989 NA non-coding upstream 1516970 18959908 ~ 18978279 (+)
XLOC_014024 NA non-coding downstream 185306 20830837 ~ 21098279 (+)
XLOC_014026 NA non-coding downstream 933738 21579269 ~ 21612272 (+)
XLOC_014027 NA non-coding downstream 1168344 21813875 ~ 21815315 (+)

Expression


Co-expression Network