XLOC_013994 (CR626877.1)


Basic Information

Item Value
gene id XLOC_013994
gene name CR626877.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 19264759 ~ 19264881 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027924
TGTGGCAGTGACATCAAACTGATAGCTAGCTTTCTGCAGCTCTCAAGCAGGGTAAGCAGGGTTGTGCCTGGTTAGTACATGGATCATGAAAgtccacatgggaaaactaggttgctacTGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100831

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027924 True 123 rRNA 0.47 1 19264759 19264881

Neighbor

gene id symbol gene type direction distance location
XLOC_013992 mrpl3 coding upstream 47496 19193851 ~ 19217263 (+)
XLOC_013991 cpne4b coding upstream 91525 19028633 ~ 19173234 (+)
XLOC_013990 cmtm8a coding upstream 276692 18983900 ~ 18988067 (+)
XLOC_013989 NA coding upstream 286480 18959908 ~ 18978279 (+)
XLOC_013988 slc39a7 coding upstream 348822 18903533 ~ 18915937 (+)
XLOC_013995 ASTE1 coding downstream 133842 19398723 ~ 19408941 (+)
XLOC_013996 wu:fc38h03 coding downstream 147811 19412692 ~ 19432928 (+)
XLOC_013997 tril coding downstream 224707 19489588 ~ 19491864 (+)
XLOC_013998 jazf1a coding downstream 246513 19511394 ~ 19545111 (+)
XLOC_013999 hibadha coding downstream 334647 19599528 ~ 19657539 (+)
XLOC_013987 FP074902.6 non-coding upstream 381224 18881888 ~ 18883535 (+)
XLOC_013986 NA non-coding upstream 430150 18833009 ~ 18834609 (+)
XLOC_013979 BX649471.1 non-coding upstream 883075 18368869 ~ 18381684 (+)
XLOC_013978 NA non-coding upstream 966848 18293368 ~ 18297911 (+)
XLOC_014003 mir196a-2 non-coding downstream 482738 19747619 ~ 19747694 (+)
XLOC_014004 CR382300.1 non-coding downstream 517532 19782413 ~ 19783624 (+)
XLOC_014014 NA non-coding downstream 1044009 20308890 ~ 20309259 (+)
XLOC_014016 NA non-coding downstream 1400456 20665337 ~ 20668756 (+)
XLOC_014017 NA non-coding downstream 1422728 20687609 ~ 20701153 (+)

Expression


Co-expression Network