CI01180000_05200856_05203377


Basic Information

Item Value
gene id CI01180000_05200856_05203377
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 5200697 ~ 5203415 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_05200856_05203377.mRNA
ACTTTAAAAAGGTTACATTAAACTTTGTGTTTCATTCATGCACTTGTGAACATGGCAGAGTGGAAACATAAGGATATGCATATTGTCACATATGATACACACAGACACTGAAACTGACTCATTCATTTACTTTCAAATTCAGGATATGTCCTGAGTCAAAATGGCTGTTAAGTTTTATATTTGTTTTTTTATGGTTACTCACACAGAGGTGTGTGTGAGAGCGGAGCTGGATGTTGCGGCGGGACTCTGGGGATGTGTAAAGTCTCCATCAGTCCTGGATCTCTCAGCTTTTAGGAGCTGCTCTCTGGGCCTCTGTGCAAGAAAAATTGCTGCTTGTTGGGATCTTGTCAGAAACAGCAAATCTGCAGTATGGAAAAATGAGTGACTGCTTTAAATCTGGTGAAATTAACTAAGATAAACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_05200856_05203377.mRNA True 422 mRNA 0.39 3 5200697 5203415

Neighbor

gene id symbol gene type direction distance location
CI01180000_05116278_05132259 SEMA4GA coding upstream 68289 5116278 ~ 5132408 (+)
CI01180000_05079440_05092661 NA coding upstream 107291 5079440 ~ 5093406 (+)
CI01180000_05049505_05055261 DCAF10, WDR32 coding upstream 145398 5049138 ~ 5055299 (+)
CI01180000_05044621_05047984 POMK coding upstream 152083 5044377 ~ 5048614 (+)
CI01180000_05035771_05039319 NA coding upstream 160651 5035771 ~ 5040046 (+)
CI01180000_05236666_05242597 LZTS2A, LZTS2 coding downstream 32308 5235723 ~ 5242748 (+)
CI01180000_05276728_05284341 SFXN3 coding downstream 73003 5276418 ~ 5284567 (+)
CI01180000_05307085_05313251 MAT1A coding downstream 103454 5306869 ~ 5313389 (+)
CI01180000_05361478_05362402 NA coding downstream 157884 5361299 ~ 5362506 (+)
CI01180000_05460865_05464029 NA coding downstream 257450 5460865 ~ 5464533 (+)
G681331 NA non-coding upstream 49275 5151212 ~ 5151422 (+)
G681330 NA non-coding upstream 51073 5149389 ~ 5149624 (+)
G681212 NA non-coding upstream 142337 5056273 ~ 5058360 (+)
G681271 NA non-coding upstream 192834 5003952 ~ 5007863 (+)
G681256 NA non-coding upstream 240018 4960036 ~ 4960679 (+)
G681335 NA non-coding downstream 44991 5248406 ~ 5249369 (+)
G681337 NA non-coding downstream 49167 5252582 ~ 5252891 (+)
G681338 NA non-coding downstream 52228 5255643 ~ 5256218 (+)
G681344 NA non-coding downstream 62462 5265877 ~ 5266136 (+)
G681346 NA non-coding downstream 67336 5270751 ~ 5271441 (+)
G681137 NA other upstream 415066 4783305 ~ 4785631 (+)
G680736 NA other upstream 1416256 3765691 ~ 3784441 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other upstream 1628300 3569165 ~ 3573135 (+)
CI01180000_02690045_02691641 NKX6-2, NKX6-2.L, NKX6.2 other upstream 2505261 2689271 ~ 2693221 (+)
G679324 NA other upstream 2803337 2388867 ~ 2397360 (+)
G681268 NA other downstream 166995 5370410 ~ 5373762 (+)
G681592 NA other downstream 1269620 6471995 ~ 6478999 (+)
G681686 NA other downstream 1429493 6632908 ~ 6634989 (+)
G681667 NA other downstream 1452431 6655846 ~ 6659546 (+)
CI01180000_07403482_07412752 HELLS other downstream 2199732 7403482 ~ 7413190 (+)

Expression


Co-expression Network