CI01180000_06755090_06760583


Basic Information

Item Value
gene id CI01180000_06755090_06760583
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 6755090 ~ 6760583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_06755090_06760583.mRNA
CATGCCTGAACGAACGTACATCGTTCGACATAAAGATATGTTTAACCTAAAGAAGGACTCAAAAACTCACCGTTTCTGTAATTGTATATTTGTAAGAGAGCAGAAAGAAGAACAGACAGACGCCACGTACAGTTCATACTCTACCGTAAAAATAGGGATCTTTGTCTCAGCCCAGTCTTCCTCTAGTTCTAGCAACCCACAACCCACGTTGAAGTGGTGCCGTCCAGTGGACGCCCAGTTTAAGTCATCGATAGCATCATCGAAATGCGAAAGTTTGTGCATTTCAGTGACTAGATATAGACATGAATCATCTGACGAGAAGGAAATTACATTTACGTGTAACCACAGTTATTTTCCATCCCATTCCCACCGCGCTCAGAGAACAGCAGCCATGCCTTTTGGGAACAGTCACAACCAGTTGAAGATGAGCAACTCCTGTGAGCAGGAATACCCTGACCTCAGCAAGCACAACAACTATATGGCCAAGGTCCTCACGCCAGCGCTGTATGAGAAGTTGCGCTCCAAACAGACACCCAGCGGGTTTACACTGGATGATGTAATCCAGACCGGGGTAGATAATCCAGCAGAATGTGGTATTTTTACACCCCATGTGTTGTTGTATTTATTTAGCAATGCTAAACTAGCCAGGCTGACCATCAAGCAGCGGCCAGCTGAGGAAGAGTATCCAGACCTCACAGAGCACAACAACCATATGGCCAAAGTCCTCACTCTGGACATGTACAAACGCCTCCGTCAGCGCTGCACACCCAACGGCTTCACCATAGATAACGTCATTCAGACTGGCGTAGATAATCCTGGCCACCCCTTCATTTTGACTGTGGGTTGTGTGGCTGGGGATGAGGAGACCTATGAGGGTGGTGATGACCTGGACTCCAATTACGTGCTGAGCTCTCGTGTCAGAACAGGCAGGAGCATCCGTGGATTCTGTCTGCCGCCCCACTGCAGTCGTGGAGAGAGAAGAGCCGTTGAGAAGCTCTCTGTGGAAGCTCTGGGTGCCCTGACTGGGGATCTCAAAGGAAAATACTACGCTCTGAAGAACATGACAGAGGCCGAGCAGCAGCAGCTCATTGATGACCATTTCCTGTTCGACAAGCCTGTATCTCCCCTGCTGCTGGCCTCAGGGATGGCTCGTGATTGGCCTGATGCCAGGGGCATCTGGCACAATGATAACAAGACATTCCTTGTGTGGGTGAATGAGGAGGACCACCTGCGTGTCATCTCCATGCAGAAAGGTGGCAACATGAAAGAGGTCTTCACCCGTTTCTGCACAGGTCTCACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_06755090_06760583.mRNA True 1302 mRNA 0.49 9 6755090 6760583

Neighbor

gene id symbol gene type direction distance location
CI01180000_06714748_06715005 NA coding upstream 39983 6714605 ~ 6715107 (+)
CI01180000_06704767_06711402 BAG5 coding upstream 42934 6704767 ~ 6712156 (+)
CI01180000_06638215_06643427 TTL coding upstream 111270 6637809 ~ 6643820 (+)
CI01180000_06608734_06626459 IKAROS, IKZF1 coding upstream 128278 6608734 ~ 6626812 (+)
CI01180000_06581704_06589445 NA coding upstream 165609 6580990 ~ 6589481 (+)
CI01180000_06762114_06762590 NA coding downstream 1531 6762114 ~ 6762772 (+)
CI01180000_06813558_06824034 NA coding downstream 52079 6812662 ~ 6824522 (+)
CI01180000_06828109_06832096 NA coding downstream 67248 6827831 ~ 6832110 (+)
CI01180000_06839627_06853120 NA coding downstream 78418 6839001 ~ 6853707 (+)
CI01180000_06911043_06921434 NA coding downstream 150413 6910996 ~ 6922648 (+)
G681708 NA non-coding upstream 17189 6737599 ~ 6737901 (+)
G681706 NA non-coding upstream 18997 6735853 ~ 6736093 (+)
G681652 NA non-coding upstream 108252 6645442 ~ 6646838 (+)
G681674 NA non-coding upstream 109767 6645108 ~ 6645323 (+)
G681685 NA non-coding upstream 123161 6631653 ~ 6631929 (+)
G681739 NA non-coding downstream 76736 6837319 ~ 6837698 (+)
G681749 NA non-coding downstream 117978 6878561 ~ 6878839 (+)
G681755 NA non-coding downstream 130301 6890884 ~ 6891084 (+)
G681791 NA non-coding downstream 223887 6984470 ~ 6984674 (+)
G681758 NA non-coding downstream 224442 6985025 ~ 6990500 (+)
G681667 NA other upstream 95544 6655846 ~ 6659546 (+)
G681686 NA other upstream 120101 6632908 ~ 6634989 (+)
G681592 NA other upstream 276091 6471995 ~ 6478999 (+)
G681268 NA other upstream 1381328 5370410 ~ 5373762 (+)
G681137 NA other upstream 1969459 4783305 ~ 4785631 (+)
CI01180000_07403482_07412752 HELLS other downstream 642564 7403482 ~ 7413190 (+)
CI01180000_07694615_07695428 MRPL14 other downstream 902840 7694529 ~ 7695667 (+)
G682232 NA other downstream 1607602 8368185 ~ 8368935 (+)
CI01180000_09036547_09038313 MGST3B other downstream 2275834 9035736 ~ 9038892 (+)
G685188 NA other downstream 4059403 10819986 ~ 10866176 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location