G681685


Basic Information

Item Value
gene id G681685
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 6631653 ~ 6631929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU802662
CACAAATCAGTTGTACTTTGCCAATGAAAATGTAATGCTAATGCAGAGGCAGAAAAACACCAAACAAAAAGAACATTTCAGGGAAGCAAGTCTCACTCAAATAAAGCGAGTGAATTCAAAATCGACTGAAAGTACAACTGGCAGCATTCTGAGCTTTGCAAAAAATGATTTATATTCTGTAACCAGACCCAAACCATTCATGTTAAAATTCATTCATTGCTTTGCAATTTGGCCTGGGTGAGTTTCCTCACCACTGCACCAGCAACTTTTATTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802662 True 277 lncRNA 0.38 1 6631653 6631929

Neighbor

gene id symbol gene type direction distance location
CI01180000_06608734_06626459 IKAROS, IKZF1 coding upstream 4841 6608734 ~ 6626812 (+)
CI01180000_06581704_06589445 NA coding upstream 42172 6580990 ~ 6589481 (+)
CI01180000_06532667_06556697 VWC2 coding upstream 74149 6532276 ~ 6557504 (+)
CI01180000_06503211_06517041 NA coding upstream 114551 6503211 ~ 6517102 (+)
CI01180000_06369051_06375352 NA coding upstream 254400 6368381 ~ 6377253 (+)
CI01180000_06638215_06643427 TTL coding downstream 5880 6637809 ~ 6643820 (+)
CI01180000_06704767_06711402 BAG5 coding downstream 72838 6704767 ~ 6712156 (+)
CI01180000_06714748_06715005 NA coding downstream 82676 6714605 ~ 6715107 (+)
CI01180000_06755090_06760583 NA coding downstream 123161 6755090 ~ 6760583 (+)
CI01180000_06762114_06762590 NA coding downstream 130185 6762114 ~ 6762772 (+)
G681683 NA non-coding upstream 1107 6630330 ~ 6630546 (+)
G681682 NA non-coding upstream 1590 6629825 ~ 6630063 (+)
G681592 NA non-coding upstream 152654 6471995 ~ 6478999 (+)
G681591 NA non-coding upstream 164429 6442303 ~ 6467224 (+)
G681606 NA non-coding upstream 227721 6397518 ~ 6403932 (+)
G681674 NA non-coding downstream 13179 6645108 ~ 6645323 (+)
G681652 NA non-coding downstream 13513 6645442 ~ 6646838 (+)
G681706 NA non-coding downstream 103924 6735853 ~ 6736093 (+)
G681708 NA non-coding downstream 105670 6737599 ~ 6737901 (+)
G681739 NA non-coding downstream 205390 6837319 ~ 6837698 (+)
G681268 NA other upstream 1257891 5370410 ~ 5373762 (+)
G681137 NA other upstream 1846022 4783305 ~ 4785631 (+)
G680736 NA other upstream 2847212 3765691 ~ 3784441 (+)
CI01180000_03571292_03571611 GNG2.L, GBG2, GNG2 other upstream 3059256 3569165 ~ 3573135 (+)
G681686 NA other downstream 979 6632908 ~ 6634989 (+)
G681667 NA other downstream 23917 6655846 ~ 6659546 (+)
CI01180000_07403482_07412752 HELLS other downstream 771218 7403482 ~ 7413190 (+)
CI01180000_07694615_07695428 MRPL14 other downstream 1031494 7694529 ~ 7695667 (+)
G682232 NA other downstream 1736256 8368185 ~ 8368935 (+)

Expression


Co-expression Network