CI01180000_06762114_06762590


Basic Information

Item Value
gene id CI01180000_06762114_06762590
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 6762114 ~ 6762772 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_06762114_06762590.mRNA
GATTGAGGAGTTGTTCAAAAACAAGGGTCACGCGTTCATGTGGAATGAGCACCTTGGCTACGTCCTCACCTGCCCATCCAACCTCGGCACAGGCCTGCGTGCAGGAGTGCATGTCAAACTGCCTAACCTCAGCAAGTACCGCCAGTTTGAAGAGGTCCTTAAGAGACTGAGGCTGCAGAAACGTGGAACAGGTAGGAACTGGAGAAAATTTAACAGCACATTACTATTACGGAGTATTGTGAACAGAAATACAGCGTGTAAACTGATGGCAATAAGAAAGTGGTGCCTCTGTTTATTAGGTGGTGTGGACACTGCAGCCGTGGGTGGTGTTTTTGACATCTCCAACGCTGACCGCCTGGGCTTCTCTGAGGTGGAGCTGATGCAGATGGTGGTGGATGGAGTCAAACTGCTGATAGAGATGGAGAAACGGCTGGAGAAAGGCCAGTCCATTGAGGACCTCATGCCTGCCCAAAAGTAGACTGCACTTCACACATTCTTCTCTCTCCACCTCCCCACACCTTTGTTAACTGATTAACTGAATGTTTGTTGACTTGTTCTTGAAAGACATGTTTTATTTAAGAGTCCTTTGTCTCTGCTCTGGTGAGTTCTTGTTACAAATACATATGTCTCAGGGCAAAACATGGATGAGAATATCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_06762114_06762590.mRNA True 659 mRNA 0.47 1 6762114 6762772

Neighbor

gene id symbol gene type direction distance location
CI01180000_06755090_06760583 NA coding upstream 1531 6755090 ~ 6760583 (+)
CI01180000_06714748_06715005 NA coding upstream 47007 6714605 ~ 6715107 (+)
CI01180000_06704767_06711402 BAG5 coding upstream 49958 6704767 ~ 6712156 (+)
CI01180000_06638215_06643427 TTL coding upstream 118294 6637809 ~ 6643820 (+)
CI01180000_06608734_06626459 IKAROS, IKZF1 coding upstream 135302 6608734 ~ 6626812 (+)
CI01180000_06813558_06824034 NA coding downstream 49890 6812662 ~ 6824522 (+)
CI01180000_06828109_06832096 NA coding downstream 65059 6827831 ~ 6832110 (+)
CI01180000_06839627_06853120 NA coding downstream 76229 6839001 ~ 6853707 (+)
CI01180000_06911043_06921434 NA coding downstream 148224 6910996 ~ 6922648 (+)
CI01180000_06992692_07007925 NA coding downstream 229920 6992692 ~ 7008521 (+)
G681708 NA non-coding upstream 24213 6737599 ~ 6737901 (+)
G681706 NA non-coding upstream 26021 6735853 ~ 6736093 (+)
G681652 NA non-coding upstream 115276 6645442 ~ 6646838 (+)
G681674 NA non-coding upstream 116791 6645108 ~ 6645323 (+)
G681685 NA non-coding upstream 130185 6631653 ~ 6631929 (+)
G681739 NA non-coding downstream 74547 6837319 ~ 6837698 (+)
G681749 NA non-coding downstream 115789 6878561 ~ 6878839 (+)
G681755 NA non-coding downstream 128112 6890884 ~ 6891084 (+)
G681791 NA non-coding downstream 221698 6984470 ~ 6984674 (+)
G681758 NA non-coding downstream 222253 6985025 ~ 6990500 (+)
G681667 NA other upstream 102568 6655846 ~ 6659546 (+)
G681686 NA other upstream 127125 6632908 ~ 6634989 (+)
G681592 NA other upstream 283115 6471995 ~ 6478999 (+)
G681268 NA other upstream 1388352 5370410 ~ 5373762 (+)
G681137 NA other upstream 1976483 4783305 ~ 4785631 (+)
CI01180000_07403482_07412752 HELLS other downstream 640375 7403482 ~ 7413190 (+)
CI01180000_07694615_07695428 MRPL14 other downstream 900651 7694529 ~ 7695667 (+)
G682232 NA other downstream 1605413 8368185 ~ 8368935 (+)
CI01180000_09036547_09038313 MGST3B other downstream 2273645 9035736 ~ 9038892 (+)
G685188 NA other downstream 4057214 10819986 ~ 10866176 (+)

Expression


Co-expression Network