G678440


Basic Information

Item Value
gene id G678440
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 147934 ~ 151652 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799069
CGGCTTTTATTTACAGCAGTATTGCACAAATGAGCACAGAGCAAGTTCAGTGCAAAATACAAAAAGATGCATTTAACAGACAAAACAAACAAAAACAAAAATTTTCATTGTGCTACAAATGTACTGGGTCCTGGGTGGCGTCAGATTGGGCGATGCGGGTGTTCAGTGCAACAGGACTGAAAAGACTCAGTCAGAGGTCCAGTGGGAGATACACAGGTTGGCCTGAAATTCATGGATTTCCCTCAGAAAAAAAAGGTTTGTTCTGGAATCAAAGAGTATGCTGCTAGAATCCTTAAGCAAAGGCAGAGAACGAAAACATAGAGCATGACACAACGCACAATGCCAGTAGCATTGAAAAACGAGGTCTTTGGTTTGAGTGGTAAACCTGGAACGGTAGACAATTGTCATTTTGGCAAAGAGAAACTATAAAACCGACATACAAACAAATGCATATGATAACACAGGGCCATGCATCTTCCACACGTGGAACGTCTAACCGACGGATCTTATATATTTACTTCTTAAACTTTCAGCAATACCTTTCATGGTAGGTAGTCAACACATCAGTTCATATTTACTTAATTCTTTGCAACTATAAAACACAGTATTATACCAACATACTTGATGACTCGTCCTGAGCCTTGTGCATTGTTTACTGGAATACTGGGACAATGGTGATAAAAAGCAAAGCCAGGAAGAGAACCAATACACCGAAATAAAGATGGAAGACTGGTTTGTTCAAGAAATCTACGTCGGCGTATTTCTCTTAGTCCCTGAGGCTAGTTAAAGGTCAATTAGTCAAGCCAGTTTGTTAGAAGTGGGGTAATGCTGGTGTTGAAAAGTGTGCACTACTAGTGGACAAGGGCAATTAACTATTAAGGGTTGCAAATTCATTCCCAAGTTTGGTGTAATAATAAAAAAATCCTGCTCCATTGAGCAAGGCACTTTATTGCAGGTTTTTTCACATGTATGATCACTTTGGGATAAAGCTGTTTGCAACAGCAACTAACTAAATGATAAAATCCACATAAAAACCCCTTGACCTAAACTAGATTCACAAAACTAGGCATAAGCACAATCTGTTGGAACATTAATGGAATCATTAAAATTTCACTTATGCTCACATTTCCCATCTCTAATAAAGACCAAACAAGGTATCAAACAAACCGAAATACCAAATGTTGAATGTTTATGACGTTAAAATAACAAATACGTCCATATTAGTTACACATACTCACTACCTTTGCCTGTCCAATGTGATTAATTTTGACTGGTATTCACTTACATAAAAAAATTCATACACTGTTCTAGTACCTGAAGGTGTTCGTAAGACCTTTTCACATGACTCTAAACAATGCCACACTTTGACCTTTGCATGAAAAGCATTGCAGACAGAGCACTGGCGAAGCAGAATAAAGTGAAAGTAAACAAGAGGCTTGACGTGCATTTGAGCCTATAACCGGAAAATGACAAGTAAAACGTATATACACTGCTCAGGACGTTGTGTTGTATATGACACGAGATGATGAGAGTTAAAATTATTCGAAATTTAAACGTTACATTATTGGTAAGGACTATGGAGCCCCACACATGACATGCAAGAAAAAAAAGTAAATCGTGCGCACAATTTAGCAAATCGCGGGAATGAAATATAAAATCATCCGCACAATTTAGCAAATCGCGAGAATGAAATAGCAAATCATTCGCACAATTTAGCAAATCGTGGGAATGAAATAGTAAATCGTGAGCACAATTTAGCAAATCGCGGGAATGAAATAGTAAATCGCGGGAATGAAATAGTAAATTGTGCGCACAATTTAGCAAATAGCGGGAATGAAATAGTAAATCATCCGCACAATTTAGCAAATCGCGGGAATGAAACAGTAAAAAGTGAGCACAATTTAGCAAATCGCAGTAATTAAATAGTAAAATCATCCACACAATTTAGCAAATCGCGAGAATGAAATAGCAAATCATCCGCACAATTTAGCAAATCGCGGGAATGAAATAGTAAATCGTCCGCACAATTTAGCAAATCGCGAGAATGAAATAGCAAATCATCCGCACAATTTAGCAAATCGCAGGAATGAAATAGTAAATCGTCCGCACAATTTAGCAAATCGAGGAAACAAAATAGTAAATTGTGCGCACGATTCAGAAAATTGAGGGATTTTTTATCCTACATGTCATATGCGAGGCTCTGTAAGGACATATCAACGGGTATAACTCTATAGGTGCGGTTACGTTAGCTAAATTTCGCAGGCAAAAATCTATAGTCTATTGTTAATAGTGTTGCTCACAGAGAAGTCACTTTCAGACCAAGCAGCTTTCTGTCAGTCGAAGCAGCTAATTTGCATGACTAACTTGAACATGAATAAAATCTGCACGGGTTTTTCGCAATCACACGAAACTCCCGAACGTGTATTGAAATGACTGGATTTCGCCTGCGAAATTTCACAGAGCAACGGTAAATGTAGCCGTGCTTTAAGGTTGCGATCTCTTGGGAAATATTCATTATTTATTTTTGTCATTTTTACTTGGCAGACAAACTACAACTTATACTAGTGCCTACTTGCCAATGTCTGCCTTTAAGCAAATCAATATAGACTACTGAGTGAATGCCATCATCTCACCTAATTAATATTCATGAGCCAGATTTTACATTTTATAATGTCCCTTCCCCTTGTACCAAAGGTTACAATGTTTGACCTGCGTTCAAGCTTTTTAAGAGTTCAGTTTATTGGGAAATGTTGACTTGAGTCATGTGAAAAGGTCTTTCATTATTTGGCTTGTAACGTGTAACTCGGAAGCCAGTGTTAAATCCATGAAAGACTGGTGAAAGTTCATTCATCATGCAAACAGTTTTTGAAAGAATAGGTAAAATATCTATATATTGTTGATGTTTTTGGTCTCAAATCAACTTCATTTTCTGTTATGGGATTAGTATATTATATTTCATCCGATTTGTATAGACTACGCAAACCAAACGCAAGTGCAAACCTGGAGCCAATAAAAACACGCGAAGGACAGGCAGAACCAATAATGTCATCGCTTGACCGACTAACGTCCGCGTTCATGAAATTACACACAAGATGTACAAATTAAATACAGTGAAAAATAAATATAAAAGCCATGAAGAAAAAAAGACAGATAGGTGAAGACAAGAAAGGAGAGGCATGTCAAGGGCAAACAGGCAATGAAGGCACGGTTTCCACACTCCGCATGGGGTTCATACGGTGCAATAAAAACCTCCACAATTGTCACGTCAACACAGCATCTAATGGCTCAGCTTTCCATGTGAACGCAGGAAACTCTGCTGTGAGTCAGTCTATGGATGGCCGAGGGTTCCCAATTAATATATCCGTCCAGATCTGCACACATCCCGACAGGTCCAAAACTGTACGCCGAAACCCGGAGAGGTTGCGGATGAGCAGCACTGCTGTTATCCCTTATTTACAAATATACAGTCAGGAGAGGGGGATGCTACATGTTTGCTACACGTCTGCTGGGCATTCAATGTGTCAATCATCTTCTTCGCAGGAAAAACTGTACTAGACGTGCAATGACGTCATTCATCCACACGACGATGGGATGTTCGTTGGGAGCGTGCAGCTGGGCCGCGTTGTTCCCGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799069 True 3634 TUCP 0.39 2 147934 151652

Neighbor

gene id symbol gene type direction distance location
CI01180000_00105493_00124081 NA coding upstream 23851 105382 ~ 124083 (+)
CI01180000_00009241_00055691 ANAPC1 coding upstream 91984 9241 ~ 55950 (+)
CI01180000_00250154_00256723 LHCGR coding downstream 98502 250154 ~ 258668 (+)
CI01180000_00263000_00297934 MERTK coding downstream 111348 263000 ~ 298466 (+)
CI01180000_00306160_00314770 NA coding downstream 154508 306160 ~ 315744 (+)
CI01180000_00361420_00364335 NA coding downstream 209768 361420 ~ 365126 (+)
CI01180000_00368639_00375465 ZC3H6 coding downstream 216987 368639 ~ 376247 (+)
G678455 NA non-coding upstream 9204 132800 ~ 138730 (+)
G678454 NA non-coding upstream 28976 113772 ~ 118958 (+)
G678447 NA non-coding upstream 36918 65156 ~ 111016 (+)
G678446 NA non-coding downstream 22159 173811 ~ 174711 (+)
G678472 NA non-coding downstream 28896 180548 ~ 180803 (+)
G678477 NA non-coding downstream 36681 188333 ~ 188553 (+)
G678488 NA non-coding downstream 68396 220048 ~ 223446 (+)
G678490 NA non-coding downstream 74840 226492 ~ 227732 (+)
G678751 NA other downstream 908191 1059843 ~ 1066091 (+)
G678637 NA other downstream 997899 1149551 ~ 1155672 (+)
G678946 NA other downstream 1366701 1518353 ~ 1612547 (+)
G679076 NA other downstream 1643518 1795170 ~ 1799433 (+)
G679324 NA other downstream 2237215 2388867 ~ 2397360 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006251 NA non-coding NC_007124.7 CM002897.2 47353962 ~ 47361276 (+)