G678446


Basic Information

Item Value
gene id G678446
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 173811 ~ 174711 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799083
CTGTTTTGCTCACTTAAAATTATCCCAAAACACACATTTATTAATATGTGTAGTAAATAAACATTTATTAATAAGTTTAATAATTAAACAATAAACATTTATTAAATTCCTTATTAATAAATGTTCACCTTTTGATTATTATTGTTTCCTCTAGTAATTATGTGTCTGATTTTTAATTTCCAACCTATTTTGGGTTCATTTTAAGCCAGACATACAGTCATTTTTAAACAATAGTTGAGTTAAATAAAACTACCCAGCAGGTTGGGCAAACATTTAACCCAACCGCTGGGTAAAAACAACCCAATCACTGAGTTTGTCCATATTTAACCCAAACTGGGTTGTTTTTAACCCAGCATTTTTAGAGTGTAGTTGTGATTCATGTTTGGCTGGTGTTTATCCCTACTTCCCATTTTAAATAGATTAGGCTAAAATCACAGAAGCATTTAAGAATTACAAAAACTGTATGAAAGACTCAATGTGCAACTCACATAACCGAAATTCCCTTCTTCATACACACACATTATTAAAAAGACAAGAAAGAGTAGTGTGGAAAAGGCCTTAGCCATTAGCAGAAAGTTCTACCATTCTTCTTGGCACAAAGAATGATGAACTTTGCATTCGTAAGTCCTGTGCATTGACCAAAGCTGTTCCAAACCGACCCGGCCAGCTCCCTGAAATCACTCAACTGCCTTCCATATCCTCATAAAGCCGTGTTCACTCGCTCAGAGCTTAGACAGAGGCTGGGTGCTGCTGGGATACTGTGGCTTGGGGTAGAAGGCCCATTCGGCTCGAGGGTTCGCGACCCCAGCGATAGGAGCCTGGATGCAGCAGGACGGGATGTTGAAGTCATCGACCACCTTCAGCGCATCATCCTTCACTGATCTGCACAGCTCCAGAAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799083 True 901 lncRNA 0.39 1 173811 174711

Neighbor

gene id symbol gene type direction distance location
CI01180000_00105493_00124081 NA coding upstream 49728 105382 ~ 124083 (+)
CI01180000_00009241_00055691 ANAPC1 coding upstream 117861 9241 ~ 55950 (+)
CI01180000_00250154_00256723 LHCGR coding downstream 75443 250154 ~ 258668 (+)
CI01180000_00263000_00297934 MERTK coding downstream 88289 263000 ~ 298466 (+)
CI01180000_00306160_00314770 NA coding downstream 131449 306160 ~ 315744 (+)
CI01180000_00361420_00364335 NA coding downstream 186709 361420 ~ 365126 (+)
CI01180000_00368639_00375465 ZC3H6 coding downstream 193928 368639 ~ 376247 (+)
G678455 NA non-coding upstream 35081 132800 ~ 138730 (+)
G678454 NA non-coding upstream 54853 113772 ~ 118958 (+)
G678447 NA non-coding upstream 62795 65156 ~ 111016 (+)
G678472 NA non-coding downstream 5837 180548 ~ 180803 (+)
G678477 NA non-coding downstream 13622 188333 ~ 188553 (+)
G678488 NA non-coding downstream 45337 220048 ~ 223446 (+)
G678490 NA non-coding downstream 51781 226492 ~ 227732 (+)
G678493 NA non-coding downstream 58905 233616 ~ 235202 (+)
G678440 NA other upstream 22159 147934 ~ 151652 (+)
G678751 NA other downstream 885132 1059843 ~ 1066091 (+)
G678637 NA other downstream 974840 1149551 ~ 1155672 (+)
G678946 NA other downstream 1343642 1518353 ~ 1612547 (+)
G679076 NA other downstream 1620459 1795170 ~ 1799433 (+)
G679324 NA other downstream 2214156 2388867 ~ 2397360 (+)

Expression


Co-expression Network