G678501


Basic Information

Item Value
gene id G678501
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 250685 ~ 250913 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU799146
TCCAATTCACAAAGTATGCACTCTGGGAGAGTACATAGGCTACTTAAAGGGGTCATGACATGAGGAATCAAATTTGAGTTTCAGTCTGTTCTTGGTCTAGCTTTGTTTATGTTACGTGGTGTTTGTAGTTTGCTTTCCTGGTGATTTTCCCTGTTCCTCGTTCAGATTACTCCATTAAAAGTTCTTGAAGATATCTCCTTCGTCGTGCGTTTGAATACTGCAACCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU799146 True 229 lncRNA 0.41 1 250685 250913

Neighbor

gene id symbol gene type direction distance location
CI01180000_00105493_00124081 NA coding upstream 126602 105382 ~ 124083 (+)
CI01180000_00009241_00055691 ANAPC1 coding upstream 194735 9241 ~ 55950 (+)
CI01180000_00263000_00297934 MERTK coding downstream 12087 263000 ~ 298466 (+)
CI01180000_00306160_00314770 NA coding downstream 55247 306160 ~ 315744 (+)
CI01180000_00361420_00364335 NA coding downstream 110507 361420 ~ 365126 (+)
CI01180000_00368639_00375465 ZC3H6 coding downstream 117726 368639 ~ 376247 (+)
CI01180000_00427700_00437883 NA coding downstream 176737 427650 ~ 438466 (+)
G678499 NA non-coding upstream 6974 243506 ~ 243711 (+)
G678493 NA non-coding upstream 15483 233616 ~ 235202 (+)
G678490 NA non-coding upstream 22953 226492 ~ 227732 (+)
G678488 NA non-coding upstream 27239 220048 ~ 223446 (+)
G678477 NA non-coding upstream 62132 188333 ~ 188553 (+)
G678448 NA non-coding downstream 48258 299171 ~ 301328 (+)
G678508 NA non-coding downstream 71836 322749 ~ 326978 (+)
G678521 NA non-coding downstream 101044 351957 ~ 444582 (+)
G678444 NA non-coding downstream 136928 387841 ~ 390386 (+)
G678554 NA non-coding downstream 183820 434733 ~ 487143 (+)
G678440 NA other upstream 99033 147934 ~ 151652 (+)
G678751 NA other downstream 808930 1059843 ~ 1066091 (+)
G678637 NA other downstream 898638 1149551 ~ 1155672 (+)
G678946 NA other downstream 1267440 1518353 ~ 1612547 (+)
G679076 NA other downstream 1544257 1795170 ~ 1799433 (+)
G679324 NA other downstream 2137954 2388867 ~ 2397360 (+)

Expression


Co-expression Network