Gene
RNA
| Item | Value |
|---|---|
| gene id | G681344 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 5265877 ~ 5266136 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU802284 | True | 260 | lncRNA | 0.40 | 1 | 5265877 | 5266136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_05236666_05242597 | LZTS2A, LZTS2 | coding | upstream | 23129 | 5235723 ~ 5242748 (+) |
| CI01180000_05200856_05203377 | NA | coding | upstream | 62462 | 5200697 ~ 5203415 (+) |
| CI01180000_05116278_05132259 | SEMA4GA | coding | upstream | 133469 | 5116278 ~ 5132408 (+) |
| CI01180000_05079440_05092661 | NA | coding | upstream | 172471 | 5079440 ~ 5093406 (+) |
| CI01180000_05049505_05055261 | DCAF10, WDR32 | coding | upstream | 210578 | 5049138 ~ 5055299 (+) |
| CI01180000_05276728_05284341 | SFXN3 | coding | downstream | 10282 | 5276418 ~ 5284567 (+) |
| CI01180000_05307085_05313251 | MAT1A | coding | downstream | 40733 | 5306869 ~ 5313389 (+) |
| CI01180000_05361478_05362402 | NA | coding | downstream | 95163 | 5361299 ~ 5362506 (+) |
| CI01180000_05460865_05464029 | NA | coding | downstream | 194729 | 5460865 ~ 5464533 (+) |
| CI01180000_05552106_05558265 | SLC25A16 | coding | downstream | 285739 | 5551875 ~ 5559075 (+) |
| G681338 | NA | non-coding | upstream | 9659 | 5255643 ~ 5256218 (+) |
| G681337 | NA | non-coding | upstream | 12986 | 5252582 ~ 5252891 (+) |
| G681335 | NA | non-coding | upstream | 16508 | 5248406 ~ 5249369 (+) |
| G681331 | NA | non-coding | upstream | 114455 | 5151212 ~ 5151422 (+) |
| G681330 | NA | non-coding | upstream | 116253 | 5149389 ~ 5149624 (+) |
| G681346 | NA | non-coding | downstream | 4615 | 5270751 ~ 5271441 (+) |
| G681350 | NA | non-coding | downstream | 34806 | 5300942 ~ 5301173 (+) |
| G681353 | NA | non-coding | downstream | 38486 | 5304622 ~ 5304830 (+) |
| G681373 | NA | non-coding | downstream | 93003 | 5359139 ~ 5359946 (+) |
| G681379 | NA | non-coding | downstream | 108293 | 5374429 ~ 5382651 (+) |
| G681137 | NA | other | upstream | 480246 | 4783305 ~ 4785631 (+) |
| G680736 | NA | other | upstream | 1481436 | 3765691 ~ 3784441 (+) |
| CI01180000_03571292_03571611 | GNG2.L, GBG2, GNG2 | other | upstream | 1693480 | 3569165 ~ 3573135 (+) |
| CI01180000_02690045_02691641 | NKX6-2, NKX6-2.L, NKX6.2 | other | upstream | 2570441 | 2689271 ~ 2693221 (+) |
| G679324 | NA | other | upstream | 2868517 | 2388867 ~ 2397360 (+) |
| G681268 | NA | other | downstream | 104274 | 5370410 ~ 5373762 (+) |
| G681592 | NA | other | downstream | 1206899 | 6471995 ~ 6478999 (+) |
| G681686 | NA | other | downstream | 1366772 | 6632908 ~ 6634989 (+) |
| G681667 | NA | other | downstream | 1389710 | 6655846 ~ 6659546 (+) |
| CI01180000_07403482_07412752 | HELLS | other | downstream | 2137011 | 7403482 ~ 7413190 (+) |
