G685953


Basic Information

Item Value
gene id G685953
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 10980248 ~ 10983846 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU807435
TGGGAGGGCAATAATGCAGTTTCTCACATACAAGAATAAAACGAAATTTCTCGATTTTGAAATTGCACATTAAAGTACGTCAAGGGACTGTTATACAGAACCATGAAGTTTCGGTTGTGCTCGTGTTACACCTTCTACAGTTGCAGGTTGCACATACTGTCGAAACAATGTCTTGCAATAAACTGTCTTCAGTAATTAATTCATCAATCACATACCTTGCATTCTGGAATAATGACAGCATAAAGTACCATACATTGTAATTACTGTGCAAAAACATAATTTAATATACTTTAGCACTAGTGTACAAAATATGGTCCAGCTCAAATGAAACATTTCCCACATCATTTCAACTGAAAATGAACATTAATAGCTGCAACAGATGGAGGACGGTTTATATATCTGCTGCTATGACCTGGAAATCAACTAGTCTGCAGTTTTATAGATCACTTAGCGATGTGGCATCATCTTTGTTGCGTGTGAAGTTTCTGGTTACCTATGCCCATAAAAAGAGATGGATAAAGTGACAAACAAATATGGAAGCTTGTTTCTGCCACAGAATAAAAAATGTATAATATAATATAACAATTATCTTAATGTATAAGATAATTGTGACTTTTTTTATCACAATTCTGACTTTTTTTCTCACAATTTAGAGTTCAGAATTGCAAGATACAGTATAAACTCGCAATTGCGAATTATAAAATCAGAATTGCAGGATATAAACTCGCAACTGCAAGAAAAAGTCAATTGTGAGACATAAACTTGCAACTTTCACAAGTTTATACAGTATTTTTGCAATTCTGACTTACTTTGACATATAAACACGCAATTGTGCATTACAAAGTCCAATTCTGAGGAAAAAAGAGACTTTATTTCTGAGAATTGCGAGGGTTATATCTCGCAATTCTGACTTTATAACATACAATTGCGACTTTATATCACGCAGTTCTGAGGAAAAAAAATCTGAATTGCGAGATGTTAACTTGCAATTGTGATAAAAAAGTGAGAATTGTGAGCTAAAAAGTCACAATTACCTTTTTTATTTTTTATGTAGTGACGGAAACAAGGTACTGTTTTAAACATACTATTTTAATTGGTTACAAAAAAAGAAAAAGTGACCTCTTGGAAACTTCTGAATTTCATCTGAGCAGCAACTCGTATCTAACTGAAATCCTAGAACTGTCCTAAACCATTAATAGTTGCAACTTGACATTATAAAAGATGTAATAAAAATGTAATTTGTCTGATAAAGAATAGTATAGCTTTAAGATCTAAATCTATCCTGTCTTTAAATTATACAGTAGTAATATTACTTCTGATGCATGATTACATTTTGGCGTGTTTTGGCATGTATAGTGTTTGAAAGACAAGCCATCCACATTTCAATTCCCTGATGAGGTCAGTGCTTTTGCAAGGGAAAGGTTCTATAAGATCAAGTGAAAGTCGTATCTGCCTGCCCTTATACCTCCTTTCTGCCACAGGCTAACCTTTACTTTGCTTTCTTTTACCAGGAGATATGTTTAATTTAATCTTAGCCTTGAGTTATGTCTGGAATGGCAGGCACAATCTCTGATGAAGGACAAATGCAACATGCATAAAAAACAAAGGTCTTAAAACCAAACTACAGTTGGCGGTCTTAAATAAATGCTTGAGGAGGAACAACAACACATAAAAAAGTCAGTTCGAAATAATGCCGTCATTGAGCACAGTTCTATTAAGACTGATCTATAAAACTCAGCAGACCACTCGTGTTTTTATACCAGGATTTGGGTTGAAATCAGCAGATGCATGTCAATTATAATGCGTTTTTCTCTTTGTGGGGCTTCTCAGTAAGTCATTTCTGCAAAACAATACCATCAACATGCACAGTTGTGTGAATTGGGGGTCATAAAAAAAAACGAAACAAAACAAAAAAAGATTGGAAACAAAGAAAAAGCTTCACCAAAGATTGATTGTTAATTTTTCTTGCTTACCACATTTGGTTGTTAATTCACAGAAATATTATGTCCCAATCCAAAGGTAGCATACAGACTCATAGTGACCGCTGCTCCCACACACCTTCCCAGAAAGCAGCAGATAATTCCATAAGAAAAGAAAAAAACACCAAAGCTCCTTGTGTTGGCCGAGAACGCCCCCCCACCCCCATCCCCTATCCCGTGCAGGAATATCCTCGGTCCATCCAGAGAGGCGACCTGTTTGTGCATCTCAGGTGGTGTGCTGTAGGATGTGCTCTGTTCCATTAGTTTATCCTTACTCGTATCCAAATCAAAATGAAGGAGTGAACGCACCGAGGCACAAAAAACAAAATGCAGATTGCTCCACAAAAGGACAGACACACCAAATTCTTCCAATCGATGTCTTGGAGGCAGTGCTTAACTATCAGTTACCTCATGCCTGGATACGATTAGCGTTTAGAAGTTTAGTCCAATTGTAATCCATATTCCACTGTTTTCAAAGGCAGATGGAGCCATATTCCTTGGCAGGGTAAAGGACAGTGACTGGGACGGTGATAGTAAACACAGCTGCTGCAGGTGCAAAACACAAGATTGTGTGTCGGACAAGCTGGAAATGAGTGAAACGACTGGAAAAACTCCTTTTTGATTTTTTTAAATATTTTTTTTTTCTAAACCACCAGGCATCAAGTCTTTAAGAATGTGGAGCTGATACATTACAAAAGTAAGTTTCTCATTCCCATATTCCTTTTTTGTACTTGGTCACCAGTTTGAATTCATATATTTATATCCATTTATATATATTTATGTATATTTTATACAGTTAAAAACACCATGGAGATGACAGACTATTTGGTTTCTTTTTCTAAGTAGAAGTTTCTCCTTAAATAAATGCATATAAATAAATTATCTTTTCACATGTTCGAGACTGCCACTCTCCCACGCTTCTACCCACAGCAGGTCCTCAGAAATTCAACGGTAGGTTTCAGTGGTATTTTGGCAGAGCGTTCCGAAGCCCCAAGACACACGGGGCGTTTGTGGTTAGTCCTGTCAACTCCTCATTGGCCAGGCTTTGTGGCATCTTTGTGTGTGTCTCTCGGGCTCACTAAGTGAGTCTCCGTGGGCCCAAAAGAGGCCACTCCCCCTTGTCCACCCCCATTTGCTAAAAGGATACACACAGTCTCTTTGGCCCCCTGAGGGACGAAGCTACTGATGTCCTCCTGTTTCCTCTGGGCATGTGCTAGCGCTCTGAGCTGTTCCTGAGCCTCGTCAAGTAGTGAGGCCACTTCCTCTCGTCTACCAGCTGCTCGGTTGGGGACCGTTACGTTGGATTGTTGATTGGCATCTGCTTTGCTTTCCAGAGGGCTAGAACGGCTGCTTCCATCAGTAGGGGTGGTTTGCATACACGAGACCTCATCCTGGTAGGAGTGGACGGAGGGGATGATTGGGATAGAGCAGGGTCGGTAGGGAGCAGGAGGACTCTGGCTAGGGCCGCCTGATCTGAGGCTCCTAGCGCACCTGTGGTCTAAGTGGCTACTCCAAGATTTTGAGGATTGTGAGGCTTGCATATTGTAAAAGGAATCCTGATGTAGGTCATTACCTGGGCCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU807435 True 3563 lncRNA 0.39 2 10980248 10983846

Neighbor

gene id symbol gene type direction distance location
CI01180000_10785561_10788308 NA coding downstream 191091 10784787 ~ 10789157 (-)
CI01180000_10538157_10538596 NA coding downstream 441652 10537077 ~ 10538596 (-)
CI01180000_10521190_10523609 GFRA1A coding downstream 456623 10520833 ~ 10523625 (-)
CI01180000_10449079_10461033 NA coding downstream 519215 10448988 ~ 10461033 (-)
CI01180000_10441696_10442635 NA coding downstream 537582 10441647 ~ 10442666 (-)
CI01180000_11077923_11087065 TSN14, TSPAN14 coding upstream 94077 11077923 ~ 11087736 (-)
CI01180000_11091600_11093609 NA coding upstream 107476 11091322 ~ 11093690 (-)
CI01180000_11098239_11100667 ELOVL6L coding upstream 113890 11097736 ~ 11100667 (-)
CI01180000_11106711_11107109 SPRN coding upstream 122620 11106466 ~ 11107894 (-)
CI01180000_11111159_11112550 NA coding upstream 126955 11110801 ~ 11112550 (-)
G685937 NA non-coding downstream 10066 10952434 ~ 10970182 (-)
G685908 NA non-coding downstream 89994 10889603 ~ 10890254 (-)
G685834 NA non-coding downstream 206384 10773477 ~ 10773864 (-)
G685788 NA non-coding downstream 270215 10709583 ~ 10710033 (-)
G685746 NA non-coding downstream 353464 10626300 ~ 10626784 (-)
G685961 NA non-coding upstream 23212 11007058 ~ 11007317 (-)
G685987 NA non-coding upstream 102779 11086625 ~ 11086950 (-)
G686008 NA non-coding upstream 138095 11121941 ~ 11122961 (-)
G686010 NA non-coding upstream 159804 11143650 ~ 11143855 (-)
G684929 NA other downstream 1078860 9895316 ~ 9901388 (-)
G684493 NA other downstream 2256381 8722693 ~ 8723867 (-)
G684182 NA other downstream 3069040 7910761 ~ 7911208 (-)
G684080 NA other downstream 3397445 7579404 ~ 7582803 (-)
G684071 NA other downstream 3454594 7506890 ~ 7525654 (-)
G686052 NA other upstream 357770 11341616 ~ 11343496 (-)

Expression


Co-expression Network