XLOC_014617 (hsbp1l1)


Basic Information

Item Value
gene id XLOC_014617
gene name hsbp1l1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 11429263 ~ 11431278 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028894
GTAAGAGGAAGTTTTTACAGCAAACGTCAATGTAAATTATGAATGAGATAGAAAAGTTGAGAAGTTTTAGAATTCACTTTTAATTATGATCAAATCTCTTTGAGACTTTTTACAGGGTTATTTTCAGACGCTTGCTGTTCCAGTTAACGTTGCCAGGAGCTGAAAcgaacaacaaaacaaaccaactTAGCAAACAAATCATGGCAGGATCCGAGTCAAAAGCTGCCAAAGATTTGACTGCAATAATGGAGACGACTATGCAGCAACTTCAGAGCAGGTTTCAAAACCTATCTGAACAGATCATCTCTAAAATGGATGAGATGGGAACTCGTATCGACGACCTGGAGAAGAATGTTGCTGATCTTATGACACAAGCAGGAGCAGAAAATCTTCAGAAATCAAATGATACTGATGAGCGAGCACGATGGCCAAAGCAATGAGCAGAAAGGCTGAGCTCAACATTTTTGTGTATTAAGTTATGCATTTATAGTTTACAGGTGCCTTATTTTGTATTCCTTGTTTACAATTTCATATACATGTTTTATGTGGACCTTGTAGCCTACCTTAAGCAATAAAGTTTGGCTtcgtgttttatttattttttcattaaattt

Function

symbol description
hsbp1l1 Predicted to enable transcription corepressor activity. Predicted to be involved in cellular heat acclimation. Predicted to be active in cytosol and nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000075984

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028894 True 614 mRNA 0.36 4 11429263 11431278

Neighbor

gene id symbol gene type direction distance location
XLOC_014616 sept7a coding downstream 3671 11331822 ~ 11425592 (-)
XLOC_014615 eepd1 coding downstream 114039 11270847 ~ 11315224 (-)
XLOC_014614 irgf3 coding downstream 180281 11247054 ~ 11248982 (-)
XLOC_014613 ssr2 coding downstream 190542 11231083 ~ 11238721 (-)
XLOC_014612 NA coding downstream 201695 11219761 ~ 11227568 (-)
XLOC_014618 kcng2 coding upstream 77682 11508960 ~ 11546516 (-)
XLOC_014619 ctdp1 coding upstream 201556 11632834 ~ 11846958 (-)
XLOC_014620 CR548625.1 coding upstream 294218 11725496 ~ 11725631 (-)
XLOC_014621 cpsf1 coding upstream 466353 11897631 ~ 11977783 (-)
XLOC_014622 rnf19a coding upstream 599554 12030832 ~ 12078583 (-)
XLOC_014711 CR382300.3 misc upstream 8297412 19728690 ~ 19728755 (-)
XLOC_014611 FP074861.1 non-coding downstream 235900 11193249 ~ 11193363 (-)
XLOC_014603 NA non-coding downstream 547755 10859122 ~ 10881508 (-)
XLOC_014600 BX005424.1 non-coding downstream 723788 10705459 ~ 10705475 (-)
XLOC_014581 BX950852.2 non-coding downstream 1305916 10123233 ~ 10123347 (-)
XLOC_014623 FP236813.1 non-coding upstream 615176 12046454 ~ 12046570 (-)
XLOC_014625 CU468682.1 non-coding upstream 699767 12131045 ~ 12131180 (-)
XLOC_014626 CU468824.1 non-coding upstream 705458 12136736 ~ 12136871 (-)
XLOC_014632 NA non-coding upstream 1189648 12620926 ~ 12623962 (-)

Expression


Co-expression Network