XLOC_014632


Basic Information

Item Value
gene id XLOC_014632
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 12620926 ~ 12623962 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030169
aaaaaaaagAAGTAATCTGGAATTTGAACAGCTTGTTAAAGCCCCTTTGTGAAAACATTAATCATAATAAGTGCCATGACGCAGTTCAGTTGTGGAGACTTTAGGCTGGATCAGAGTTCTTCATCTCCATTTCAGGAAAACGAGATATTCGGAAAATgtaaaaaggaaggaaagaattCCCAGGAACAGGCAAAGACCTGTGGATTGACGGAGAACAAAAGTAACCAAGGATAGCCGTTTTTACCCTCTCTTTAACCAGAATAAGTGCAACGTAAAGACTTGCTGTTGTAGTTGTGAGTCGCACATCCCCAAGATTAAGATTATATCATGGCACTCAATTTGGATTTTGATTGGTTGTGAACAGTTTCTGTGCACAAGTCCTGGAAATGAACAAAAAAACGAATACAAAATTTCTCAATCCTATGACCCATGTGGTCTCTCACGCAAACAATCTGTGCCAACAcacgtgttttgttttaaatacaggAAAGCATACAAAAACCAAACAAAGAGCTTTAGCCGAGGAGCCCAAACATCCATACAAGGCCCCGAAgttctagcaaaaaaaaaaaaaaaacatacaaaaaaataaactttgtaaGCTTGGTTCCTCAATTTCTTCGATTTAAATTGTGCAAGGGGAGTGGTCTAACCGTGAAGCCACTCCCCCTTTAGGTCCAGGAGGAAGTACCAGAGAGCGCAGATGACGACACGCGCTCTCTACTGCCCTCTAGTGCCTCCTAGTCACACGGGTTTGTCGCGCCGACTATCCTTAACCTTGACGAACAGGGTTGTGCTTGCGCCAGGCTGGCCGGAGCGGCTGGCTGTCCTCTGATTGGAGGGTGGTGCGTTATTGCTGTGCTGGTGCAGGAAGGAGGCGGAGCCTGGATAAGTCTGACCCATCACCTCACTATAGGTAGGTGGCGGTCCCTCCACGTGCGAGTTCGAGGCACTCTTGCCAGAGTTGCTGCTCGGGGGCCGCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030169 True 983 lncRNA 0.46 2 12620926 12623962

Neighbor

gene id symbol gene type direction distance location
XLOC_014631 ftr56 coding downstream 216336 12398544 ~ 12404590 (-)
XLOC_014630 ptpn2b coding downstream 228107 12362787 ~ 12392819 (-)
XLOC_014629 ncaldb coding downstream 296412 12297100 ~ 12324514 (-)
XLOC_014628 znf706 coding downstream 408130 12206158 ~ 12212796 (-)
XLOC_014627 ywhaz coding downstream 427304 12164428 ~ 12193622 (-)
XLOC_014633 fam210aa coding upstream 6452 12630414 ~ 12648408 (-)
XLOC_014634 AL928820.1 coding upstream 9187 12633149 ~ 12633263 (-)
XLOC_014635 slc25a32a coding upstream 313104 12937066 ~ 13009415 (-)
XLOC_014636 NA coding upstream 561991 13185953 ~ 13188728 (-)
XLOC_014637 zfpm2b coding upstream 569253 13193215 ~ 13286738 (-)
XLOC_014711 CR382300.3 misc upstream 7104728 19728690 ~ 19728755 (-)
XLOC_014626 CU468824.1 non-coding downstream 484055 12136736 ~ 12136871 (-)
XLOC_014625 CU468682.1 non-coding downstream 489746 12131045 ~ 12131180 (-)
XLOC_014623 FP236813.1 non-coding downstream 574356 12046454 ~ 12046570 (-)
XLOC_014620 CR548625.1 non-coding downstream 895295 11725496 ~ 11725631 (-)
XLOC_014612 NA non-coding downstream 1393358 11219761 ~ 11227568 (-)
XLOC_014638 CR450687.1 non-coding upstream 740574 13364536 ~ 13370153 (-)
XLOC_014639 NA non-coding upstream 828896 13452858 ~ 13456995 (-)
XLOC_014646 NA non-coding upstream 1438080 14062042 ~ 14066550 (-)

Expression


Co-expression Network