XLOC_014627 (ywhaz)


Basic Information

Item Value
gene id XLOC_014627
gene name ywhaz
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 12164428 ~ 12193622 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00028912
CACAGAGTGGCAGCTGATTAGTGCAGACGGAGACCGAGCGACCACTCTCACTCACAGAACCAAGCAGCCATGGACAAGAGCCAACATGTGCAGAGGGCCAAACTGGCAGAGCAGGCCGAACGCTATGACGACATGGCTGACTCTATGAAGAAAGTGACTGAACTGGGAGAGGAACTGAGTGATGAGGAGAGAAACCTGCTCTCTGTGGCCTACAAGAATGTGGTGGGAGCTCGCCGGTCTGCCTGGAGGGTAGTGTCCAGCATCGAGCAGAAGACCGAAGGCACTGACAAAAAGCAGATGGCTCAAGAGTACCGTGAGAAGATCGAAGCCGAGCTGAAGGCCATCTGCAACGACGTTCTGCATCTGCTGGACAAGTTTCTGATCCGCAGCACATCTCCAGCAGAGAGCCAGGTATTCTACCTGAAGATGAAGGGTGACTATTACCGCTACCTGGCAGAAGTCGCTACAGGAGACGAGAAAACCAATATCATCCAGAAGTCTCAGGAAGGTTACCAGGCCGCCTTTGACATCAGCAAAGACAACATGCAGCCCACTCATCCCATCCGCCTGGGCCTGGCTCTCAATTTCTCAGTCTTTTACTATGAGATCCTGAACTCTCCAGAGCAGGCCTGTGATCTGGCCAAGAAGGCATTTGATGATGCCATTTCTGAGCTGGACCAGTTAACTGAAGATTCGTATAAAGACAGCACACTCATCATGCAGCTACTAAGAGACAATCTGACActgtGGACCTCTGACAATCAGGCAGACGGTGATGAGACAGAGGAGGGCCGGCAGAACTAAAGCCAACTCCACAAAGAAGCTTTTCAGTCAGCACAGCGAGAGACAACGCTGACGCTTTTACAGTTCCAGCTTCATACTCACCAGCccgtcatttgtgtgtgtgtgtttggatttgAGAGTGCGAAGGAAAGACCGTGTTTGTGTACGTGTGtttgtttgggggggggggggggcaaaccCGCAGTTTGTCTTTCAAATGTGTTAACTGTGGATTGGAGATGATGTGTGTTCATGCATGTGCTGATGCGTGTCTCCATGAAGCCAACAGTCGGTGCGTATGTGAGAGCGAGAGCGAGAGTTTGCATCCTTTTCCGAGTTCGCTAGGGGAGCATTTAGTGATGGGTTTCTTGTGGCTTAGACTGAATTCTTCATTTTCCTAAAGAATCATGGAAAACAAACCAAAAGTCAGTATGAACGAGTACTTGTGACACATTGGGCTTGTGCAAGACATTCTACTTCAGCTGTCAAGTGCGTTTTCTCATTGGTGAATATCGCATACAATCTCTCTGTCAAACACAGacctaagataaaaaaaacaaaacaaaaaaaaaagacttgacaCATGGCTTATACTGTAACTTTGATATAAGAGTCTTGTTACCGAAGCAGTAAGTAATGCTTTTAATGTGCTTCTCTGATTAATACTGTTTTCTATTAGGATTTTTGGTTTCGTTTTAtttgtactactactactactacttgcGAAATCtcgtttttagtttgttttgtttactcCTTTTGATACTTGGCTAAACTGCATGTGGCTTTAGTTAATCAGGGTGACTGGAGTTGGCTGATTGGGCTGCCTGTCTTTGGATTTTCATACAGAAACACTCAgcattattgttatttgttatgaAGGGTGGGCGGAGGGATCTGGATTTCATGTTAGTGgaattaaaacagataaaacaaa

Function

symbol description
ywhaz Predicted to enable monooxygenase activity. Is expressed in several structures, including EVL; epidermis; nervous system; periderm; and tail bud. Orthologous to human YWHAB (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta) and YWHAZ (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005575 cellular_component cellular_component
GO:0004497 monooxygenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8554 Predicted to enable monooxygenase activity. Is expressed in several structures, including EVL; epidermis; nervous system; periderm; and tail bud. Orthologous to human YWHAB (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta) and YWHAZ (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta).

Ensembl:

ensembl_id ENSDARG00000032575

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00028912 True 1720 mRNA 0.46 6 12164428 12193622

Neighbor

gene id symbol gene type direction distance location
XLOC_014624 pabpc1b coding downstream 18663 12121944 ~ 12145765 (-)
XLOC_014626 CU468824.1 coding downstream 27557 12136736 ~ 12136871 (-)
XLOC_014625 CU468682.1 coding downstream 33248 12131045 ~ 12131180 (-)
XLOC_014622 rnf19a coding downstream 85845 12030832 ~ 12078583 (-)
XLOC_014623 FP236813.1 coding downstream 117858 12046454 ~ 12046570 (-)
XLOC_014628 znf706 coding upstream 12536 12206158 ~ 12212796 (-)
XLOC_014629 ncaldb coding upstream 103478 12297100 ~ 12324514 (-)
XLOC_014630 ptpn2b coding upstream 169165 12362787 ~ 12392819 (-)
XLOC_014631 ftr56 coding upstream 204922 12398544 ~ 12404590 (-)
XLOC_014632 NA coding upstream 427304 12620926 ~ 12623962 (-)
XLOC_014711 CR382300.3 misc upstream 7535068 19728690 ~ 19728755 (-)
XLOC_014620 CR548625.1 non-coding downstream 438797 11725496 ~ 11725631 (-)
XLOC_014612 NA non-coding downstream 936860 11219761 ~ 11227568 (-)
XLOC_014634 AL928820.1 non-coding upstream 439527 12633149 ~ 12633263 (-)
XLOC_014636 NA non-coding upstream 992331 13185953 ~ 13188728 (-)
XLOC_014638 CR450687.1 non-coding upstream 1170914 13364536 ~ 13370153 (-)
XLOC_014639 NA non-coding upstream 1259236 13452858 ~ 13456995 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000320_00331521_00343779 YWHAZ coding CI01000320 null 331481 ~ 343779 (-)