XLOC_015079 (si:ch73-359m17.2)


Basic Information

Item Value
gene id XLOC_015079
gene name si:ch73-359m17.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 48382963 ~ 48391434 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029679
GTCCTGATGGCGGTCTTCGCCTCACCGGCAAACAGTCTCCTCTGTGTTCCCTTTTCCCGCCGAGGCACGGTCGGCCGCGAGAGTGTGTTCTGAGCGCCGTGTTTTACCGATTGTCGCGCGGGCGGAATGAGTTCTGGCGGTTCGACGGAAACATTAACGTTACCAGACTCGACGCTGTTTATAACGGAGAGCGCATGCGCGTCCGTTGGGCCGACAATCACGCGCTTCCCGCCATTTCGCGGTTTGTTTCTGGCGAAGCACAACGCTAAACGCAACCGGCAGAAGATTTCGCGTTTATGTTCGGATAACCGGTTTTTGGAGGCCGGCATAGCCTCGGGATCTGCTCCGGTAATAACACTCACTTTGGAGGAGACTGTACCTGGATCAGCTGTTGCCGGTTTCGGAGAGCCGCCGTCCACAGATCATGATGGGTGAACCTGTGATGTTGTGGCTCGCTCTGCTCTTGGGGTTGTGTGTCACTGATGTGGCGCCGGctaaTCTGGCTCTGGGCGCCGCAGCGGTGCAGTCGTCCACTGGAGACCCCAATGGAAACGCTGAGCACGCAGTGGACGGAAACACAGAAGCAGACTACCGTAAGGGCTCCTGCACACACACCAGCCGTGAGTTTAACCCCTGGTGGAGGGTGGATCTGGGTGGAGTGTCCAGCGTCAACAAAGTCACCATCACCAACAGAGGAGACTGCTGTGAGGAGCGCATACGTGGAGCGCAGATCCGCATCGGGGACAGCCTGGAGAACAACGGAAACAACAACCAGCTAGCTGCTACTCTTCTGGATGCTATTAAAGGCTCTCAGACGTTCGAGTTTCAGCCGATTCAGGGCCGATACCTCAATGTTTTCCTGCCCGGGAATGATGAAACTCTGAGTCTGTGTGAAGTGGAGGTGTTTTCAGGTCCATCAAAGAATATTGCCGCTGGAGCCGCCGCCATTCAGTCCTCCACTTGGCCTCATGATGGTGACGCAGGGAACGCTGTGGACGGAAGCACTGAGTCTGAGTATCAGGAGGGCTCCTGTTCACACACTCTGGGGGAAACCAACCCGTGGTGGAGGGTGGATCTAGGGAGAGTGTTCAGCATCCGCCGTGTCAGCATCACCAACAGAGGAGACTGCTGTGAGGAGAGGTTAAACGGAGCTGAGATCCGCATCGGGAACAGCCTGGAGAACAACGGAAACAGCAACCACCTagtTGCGACTGTCGAGCACATTCCAGCTGGAAACACCGAGACGTTTGAGTTCCAGCCGGTTCAGGGCAGATTCCTCAACATTGTACTGCCTGGTGTAAACGTTTACCTCACTCTGTGTGAAGTGCAGGTGTTCACAGACTGAGGACTGAGCTGAAGCGGATCACAGAAACAGGAATACACAGCAGACTCAGTTTGGCTCGAATCTTCCAGTTTCTGCTAATGTTGTAATAAAGATGAGTGTCTGA
>TCONS_00029680
TGTAGATCAGCACTCTTTACCACTCGAGGACAGACAgATCATGATGGGTGAACCTGTGATGTTGTGGCTCGCTCTGCTCTTGGGGTTGTGTGTCACTGATGTGGCGCCGGctaaTCTGGCTCTGGGCGCCGCAGCGGTGCAGTCGTCCACTGGAGACCCCAATGGAAACGCTGAGCACGCAGTGGACGGAAACACAGAAGCAGACTACCGTAAGGGCTCCTGCACACACACCAGCCGTGAGTTTAACCCCTGGTGGAGGGTGGATCTGGGTGGAGTGTCCAGCGTCAACAAAGTCACCATCACCAACAGAGGAGACTGCTGTGAGGAGCGCATACGTGGAGCGCAGATCCGCATCGGGGACAGCCTGGAGAACAACGGAAACAACAACCAGCTAGCTGCTACTCTTCTGGATGCTATTAAAGGCTCTCAGACGTTCGAGTTTCAGCCGATTCAGGGCCGATACCTCAATGTTTTCCTGCCCGGGAATGATGAAACTCTGAGTCTGTGTGAAGTGGAGGTGTTTTCAGCAGGTCCATCAAAGAATATTGCCGCTGGAGCCGCCGCCATTCAGTCCTCCACTTGGCCTCATGATGGTGACGCAGGGAACGCTGTGGACGGAAGCACTGAGTCTGAGTATCAGGAGGGCTCCTGTTCACACACTCTGGGGGAAACCAACCCGTGGTGGAGGGTGGATCTAGGGAGAGTGTTCAGCATCCGCCGTGTCAGCATCACCAACAGAGGA
>TCONS_00029681
CCTCACCGGCAAACAGTCTCCTCTGTGTTCCCTTTTCCCGCCGAGGCACGATCATGATGGGTGAACCTGTGATGTTGTGGCTCGCTCTGCTCTTGGGGTTGTGTGTCACTGATGTGGCGCCGGctaaTCTGGCTCTGGGCGCCGCAGCGGTGCAGTCGTCCACTGGAGACCCCAATGGAAACGCTGAGCACGCAGTGGACGGAAACACAGAAGCAGACTACCGTAAGGGCTCCTGCACACACACCAGCCGTGAGTTTAACCCCTGGTGGAGGGTGGATCTGGGTGGAGTGTCCAGCGTCAACAAAGTCACCATCACCAACAGAGGAGACTGCTGTGAGGAGCGCATACGTGGAGCGCAGATCCGCATCGGGGACAGCCTGGAGAACAACGGAAACAACAACCAGCTAGCTGCTACTCTTCTGGATGCTATTAAAGGCTCTCAGACGTTCGAGTTTCAGCCGATTCAGGGCCGATACCTCAATGTTTTCCTGCCCGGGAATGATGAAACTCTGAGTCTGTGTGAAGTGGAGGTGTTTTCAGGT

Function

symbol description
si:ch73-359m17.2 Predicted to enable carbohydrate binding activity.

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141222-90 Predicted to enable carbohydrate binding activity.

Ensembl:

ensembl_id ENSDARG00000102119

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029679 False 1448 mRNA 0.55 7 48382963 48391434
TCONS_00029680 False 742 mRNA 0.56 5 48383524 48389386
TCONS_00029681 True 542 mRNA 0.56 4 48386253 48391415

Neighbor

gene id symbol gene type direction distance location
XLOC_015078 rpl14 coding downstream 11871 48364312 ~ 48371092 (-)
XLOC_015077 NA coding downstream 33962 48339346 ~ 48349001 (-)
XLOC_015076 NA coding downstream 46428 48334088 ~ 48336535 (-)
XLOC_015075 NA coding downstream 52662 48328548 ~ 48330301 (-)
XLOC_015074 si:ch73-359m17.9 coding downstream 70854 48308750 ~ 48312109 (-)
XLOC_014711 CR382300.3 misc downstream 28654208 19728690 ~ 19728755 (-)
XLOC_015072 NA non-coding downstream 141126 48237650 ~ 48241837 (-)
XLOC_015071 NA non-coding downstream 196806 48185298 ~ 48186157 (-)

Expression


Co-expression Network